Gene : Glyma.18G181300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641:SF457 - TRANSCRIPTION FACTOR AS1 Genomic Order:  1813
Name:  ? Glyma.18G181300 Secondary Identifier:  ? PAC:30554394
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G181300 0.5kb upstream 0.5kb upstream 3484 true Chr18: 43614909-43618392 Glycine max
Glyma.18G181300 0.5kb upstream 0.5kb upstream 500 false Chr18: 43617893-43618392 Glycine max
Glyma.18G181300 0.5kb downstream 0.5kb downstream 3484 true Chr18: 43614409-43617892 Glycine max
Glyma.18G181300 0.5kb downstream 0.5kb downstream 500 false Chr18: 43614409-43614908 Glycine max
Glyma.18G181300 1.0kb upstream 1.0kb upstream 3984 true Chr18: 43614909-43618892 Glycine max
Glyma.18G181300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 43617893-43618892 Glycine max
Glyma.18G181300 1.0kb downstream 1.0kb downstream 3984 true Chr18: 43613909-43617892 Glycine max
Glyma.18G181300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 43613909-43614908 Glycine max
Glyma.18G181300 2.0kb upstream 2.0kb upstream 4984 true Chr18: 43614909-43619892 Glycine max
Glyma.18G181300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 43617893-43619892 Glycine max
Glyma.18G181300 2.0kb downstream 2.0kb downstream 4984 true Chr18: 43612909-43617892 Glycine max
Glyma.18G181300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 43612909-43614908 Glycine max
Glyma.18G181300 5.0kb upstream 5.0kb upstream 7984 true Chr18: 43614909-43622892 Glycine max
Glyma.18G181300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 43617893-43622892 Glycine max
Glyma.18G181300 5.0kb downstream 5.0kb downstream 7984 true Chr18: 43609909-43617892 Glycine max
Glyma.18G181300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 43609909-43614908 Glycine max
Glyma.18G181300 10.0kb upstream 10.0kb upstream 12984 true Chr18: 43614909-43627892 Glycine max
Glyma.18G181300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 43617893-43627892 Glycine max
Glyma.18G181300 10.0kb downstream 10.0kb downstream 12984 true Chr18: 43604909-43617892 Glycine max
Glyma.18G181300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 43604909-43614908 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299179 5265 Fabidae View MSA
124071895 5270 Rosid View MSA
123753219 5271 Pentapetalae View MSA
122787054 5272 Eudicot View MSA
122045280 5273 Angiosperm View MSA
121310428 5274 Embryophyte View MSA
123347915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2021 0.0 48.5015    
cufflinks 40.5156 0.0 151.943 High High
cufflinks 7.79813 0.0 28.1823    
cufflinks 22.3407 0.0 76.9929 High  
cufflinks 4.32687 0.0 15.4539    
cufflinks 3.54815 0.0 13.471   Low
cufflinks 37.9294 0.0 140.645 High High
cufflinks 18.573 0.0 63.42    
cufflinks 1.72156 0.0 8.26163   Low
cufflinks 5.409        
cufflinks 0.164       Low
cufflinks 5.308        
cufflinks 0.271        
cufflinks 0.42        
cufflinks 0.044     Low Low
cufflinks 9.173     High  
cufflinks 0.219        
cufflinks 7.253        
cufflinks 14.617     High High
cufflinks 8.495     High  
cufflinks 0.293        
cufflinks 10.531     High High
cufflinks 9.382     High  
cufflinks 0.175       Low
cufflinks 7.6     High  
cufflinks 0.171       Low

0 Strain