Gene : Glyma.18G183500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11709:SF66 - LACCASE-17 Genomic Order:  1835
Name:  ? Glyma.18G183500 Secondary Identifier:  ? PAC:30557835
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G183500 0.5kb upstream 0.5kb upstream 4639 true Chr18: 44264656-44269294 Glycine max
Glyma.18G183500 0.5kb upstream 0.5kb upstream 500 false Chr18: 44264656-44265155 Glycine max
Glyma.18G183500 0.5kb downstream 0.5kb downstream 4639 true Chr18: 44265156-44269794 Glycine max
Glyma.18G183500 0.5kb downstream 0.5kb downstream 500 false Chr18: 44269295-44269794 Glycine max
Glyma.18G183500 1.0kb upstream 1.0kb upstream 5139 true Chr18: 44264156-44269294 Glycine max
Glyma.18G183500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 44264156-44265155 Glycine max
Glyma.18G183500 1.0kb downstream 1.0kb downstream 5139 true Chr18: 44265156-44270294 Glycine max
Glyma.18G183500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 44269295-44270294 Glycine max
Glyma.18G183500 2.0kb upstream 2.0kb upstream 6139 true Chr18: 44263156-44269294 Glycine max
Glyma.18G183500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 44263156-44265155 Glycine max
Glyma.18G183500 2.0kb downstream 2.0kb downstream 6139 true Chr18: 44265156-44271294 Glycine max
Glyma.18G183500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 44269295-44271294 Glycine max
Glyma.18G183500 5.0kb upstream 5.0kb upstream 9139 true Chr18: 44260156-44269294 Glycine max
Glyma.18G183500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 44260156-44265155 Glycine max
Glyma.18G183500 5.0kb downstream 5.0kb downstream 9139 true Chr18: 44265156-44274294 Glycine max
Glyma.18G183500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 44269295-44274294 Glycine max
Glyma.18G183500 10.0kb upstream 10.0kb upstream 14139 true Chr18: 44255156-44269294 Glycine max
Glyma.18G183500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 44255156-44265155 Glycine max
Glyma.18G183500 10.0kb downstream 10.0kb downstream 14139 true Chr18: 44265156-44279294 Glycine max
Glyma.18G183500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 44269295-44279294 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310343 5265 Fabidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.14062 0.0 0.547156 Low  
cufflinks 0.0106527 0.0 0.0483101 Low Low
cufflinks 0.0343536 0.0 0.141727 Low  
cufflinks 2.35281 0.0 7.41928    
cufflinks 1.31579 0.0 4.47923    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 20.3688 0.0 54.5553   High
cufflinks 1.54197 0.0 5.15215    
cufflinks 10.897     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.887       High
cufflinks 0.003     Low Low
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.064     Low  

0 Strain