Gene : Glyma.18G169800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23324:SF56 - CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED Genomic Order:  1698
Name:  ? Glyma.18G169800 Secondary Identifier:  ? PAC:30556551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G169800 0.5kb upstream 0.5kb upstream 10922 true Chr18: 39733569-39744490 Glycine max
Glyma.18G169800 0.5kb upstream 0.5kb upstream 500 false Chr18: 39743991-39744490 Glycine max
Glyma.18G169800 0.5kb downstream 0.5kb downstream 10922 true Chr18: 39733069-39743990 Glycine max
Glyma.18G169800 0.5kb downstream 0.5kb downstream 500 false Chr18: 39733069-39733568 Glycine max
Glyma.18G169800 1.0kb upstream 1.0kb upstream 11422 true Chr18: 39733569-39744990 Glycine max
Glyma.18G169800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 39743991-39744990 Glycine max
Glyma.18G169800 1.0kb downstream 1.0kb downstream 11422 true Chr18: 39732569-39743990 Glycine max
Glyma.18G169800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 39732569-39733568 Glycine max
Glyma.18G169800 2.0kb upstream 2.0kb upstream 12422 true Chr18: 39733569-39745990 Glycine max
Glyma.18G169800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 39743991-39745990 Glycine max
Glyma.18G169800 2.0kb downstream 2.0kb downstream 12422 true Chr18: 39731569-39743990 Glycine max
Glyma.18G169800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 39731569-39733568 Glycine max
Glyma.18G169800 5.0kb upstream 5.0kb upstream 15422 true Chr18: 39733569-39748990 Glycine max
Glyma.18G169800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 39743991-39748990 Glycine max
Glyma.18G169800 5.0kb downstream 5.0kb downstream 15422 true Chr18: 39728569-39743990 Glycine max
Glyma.18G169800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 39728569-39733568 Glycine max
Glyma.18G169800 10.0kb upstream 10.0kb upstream 20422 true Chr18: 39733569-39753990 Glycine max
Glyma.18G169800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 39743991-39753990 Glycine max
Glyma.18G169800 10.0kb downstream 10.0kb downstream 20422 true Chr18: 39723569-39743990 Glycine max
Glyma.18G169800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 39723569-39733568 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041205 5273 Angiosperm View MSA
122304667 5265 Fabidae View MSA
124062276 5270 Rosid View MSA
123747759 5271 Pentapetalae View MSA
122791330 5272 Eudicot View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54096 0.0 16.6558   Low
cufflinks 5.80924 0.0 29.3104    
cufflinks 3.91844 0.0 20.4328    
cufflinks 8.16984 0.0 39.2695   High
cufflinks 7.12511 0.0 35.8877    
cufflinks 6.82281 0.0 31.4477    
cufflinks 5.30106 0.0 27.5821    
cufflinks 7.72475 0.0 37.8028    
cufflinks 5.10557 0.0 26.679    
cufflinks 0.254       High
cufflinks 0.071       Low
cufflinks 0.151        
cufflinks 0.229       High
cufflinks 0.27       High
cufflinks 0.086        
cufflinks 0.128        
cufflinks 0.057     Low Low
cufflinks 0.289       High
cufflinks 0.238       High
cufflinks 0.113        
cufflinks 0.098        
cufflinks 0.124        
cufflinks 0.118        
cufflinks 0.09        
cufflinks 0.113        
cufflinks 0.095        

0 Strain