Gene : Glyma.18G171000 G. max Wm82.a2.v1
Defline:  (1 of 13) KOG4249 - Uncharacterized conserved protein Genomic Order:  1710
Name:  ? Glyma.18G171000 Secondary Identifier:  ? PAC:30556348
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G171000 0.5kb upstream 0.5kb upstream 7827 true Chr18: 40217238-40225064 Glycine max
Glyma.18G171000 0.5kb upstream 0.5kb upstream 500 false Chr18: 40224565-40225064 Glycine max
Glyma.18G171000 0.5kb downstream 0.5kb downstream 7827 true Chr18: 40216738-40224564 Glycine max
Glyma.18G171000 0.5kb downstream 0.5kb downstream 500 false Chr18: 40216738-40217237 Glycine max
Glyma.18G171000 1.0kb upstream 1.0kb upstream 8327 true Chr18: 40217238-40225564 Glycine max
Glyma.18G171000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 40224565-40225564 Glycine max
Glyma.18G171000 1.0kb downstream 1.0kb downstream 8327 true Chr18: 40216238-40224564 Glycine max
Glyma.18G171000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 40216238-40217237 Glycine max
Glyma.18G171000 2.0kb upstream 2.0kb upstream 9327 true Chr18: 40217238-40226564 Glycine max
Glyma.18G171000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 40224565-40226564 Glycine max
Glyma.18G171000 2.0kb downstream 2.0kb downstream 9327 true Chr18: 40215238-40224564 Glycine max
Glyma.18G171000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 40215238-40217237 Glycine max
Glyma.18G171000 5.0kb upstream 5.0kb upstream 12327 true Chr18: 40217238-40229564 Glycine max
Glyma.18G171000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 40224565-40229564 Glycine max
Glyma.18G171000 5.0kb downstream 5.0kb downstream 12327 true Chr18: 40212238-40224564 Glycine max
Glyma.18G171000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 40212238-40217237 Glycine max
Glyma.18G171000 10.0kb upstream 10.0kb upstream 17327 true Chr18: 40217238-40234564 Glycine max
Glyma.18G171000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 40224565-40234564 Glycine max
Glyma.18G171000 10.0kb downstream 10.0kb downstream 17327 true Chr18: 40207238-40224564 Glycine max
Glyma.18G171000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 40207238-40217237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306325 5265 Fabidae View MSA
124067198 5270 Rosid View MSA
123740356 5271 Pentapetalae View MSA
122792497 5272 Eudicot View MSA
122041565 5273 Angiosperm View MSA
121347717 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.8773 0.0 24.8897   High
cufflinks 2.12156 0.0 11.0626    
cufflinks 4.41838 0.0 15.3841   High
cufflinks 2.48598 0.0 10.5249    
cufflinks 1.98712 0.0 10.5658    
cufflinks 1.36219 0.0 8.10529   Low
cufflinks 1.84208 0.0 10.0164    
cufflinks 1.91271 0.0 8.87622    
cufflinks 2.24349 0.0 9.69314    
cufflinks 0.147       Low
cufflinks 0.305        
cufflinks 0.439       High
cufflinks 0.261        
cufflinks 0.306        
cufflinks 0.297        
cufflinks 0.322        
cufflinks 0.224       Low
cufflinks 0.391        
cufflinks 0.34        
cufflinks 0.397        
cufflinks 0.309        
cufflinks 0.391        
cufflinks 0.386        
cufflinks 0.307        
cufflinks 0.404        
cufflinks 0.199       Low

0 Strain