Gene : Glyma.18G171400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15898:SF1 - GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG Genomic Order:  1714
Name:  ? Glyma.18G171400 Secondary Identifier:  ? PAC:30555232
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G171400 0.5kb upstream 0.5kb upstream 7697 true Chr18: 40374338-40382034 Glycine max
Glyma.18G171400 0.5kb upstream 0.5kb upstream 500 false Chr18: 40374338-40374837 Glycine max
Glyma.18G171400 0.5kb downstream 0.5kb downstream 7697 true Chr18: 40374838-40382534 Glycine max
Glyma.18G171400 0.5kb downstream 0.5kb downstream 500 false Chr18: 40382035-40382534 Glycine max
Glyma.18G171400 1.0kb upstream 1.0kb upstream 8197 true Chr18: 40373838-40382034 Glycine max
Glyma.18G171400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 40373838-40374837 Glycine max
Glyma.18G171400 1.0kb downstream 1.0kb downstream 8197 true Chr18: 40374838-40383034 Glycine max
Glyma.18G171400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 40382035-40383034 Glycine max
Glyma.18G171400 2.0kb upstream 2.0kb upstream 9197 true Chr18: 40372838-40382034 Glycine max
Glyma.18G171400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 40372838-40374837 Glycine max
Glyma.18G171400 2.0kb downstream 2.0kb downstream 9197 true Chr18: 40374838-40384034 Glycine max
Glyma.18G171400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 40382035-40384034 Glycine max
Glyma.18G171400 5.0kb upstream 5.0kb upstream 12197 true Chr18: 40369838-40382034 Glycine max
Glyma.18G171400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 40369838-40374837 Glycine max
Glyma.18G171400 5.0kb downstream 5.0kb downstream 12197 true Chr18: 40374838-40387034 Glycine max
Glyma.18G171400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 40382035-40387034 Glycine max
Glyma.18G171400 10.0kb upstream 10.0kb upstream 17197 true Chr18: 40364838-40382034 Glycine max
Glyma.18G171400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 40364838-40374837 Glycine max
Glyma.18G171400 10.0kb downstream 10.0kb downstream 17197 true Chr18: 40374838-40392034 Glycine max
Glyma.18G171400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 40382035-40392034 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299915 5265 Fabidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.437 0.0 46.0058    
cufflinks 15.7475 0.0 53.2414    
cufflinks 13.3464 0.0 45.859    
cufflinks 15.6605 0.0 58.8536    
cufflinks 14.1863 0.0 53.8084    
cufflinks 19.8305 0.0 75.2178   High
cufflinks 19.8259 0.0 67.6675   High
cufflinks 13.8211 0.0 52.1898    
cufflinks 15.4329 0.0 58.3329    
cufflinks 1.348        
cufflinks 2.282       High
cufflinks 1.393        
cufflinks 1.361        
cufflinks 1.383        
cufflinks 1.582        
cufflinks 1.642        
cufflinks 1.005       Low
cufflinks 1.53        
cufflinks 1.676        
cufflinks 1.624        
cufflinks 1.962       High
cufflinks 1.569        
cufflinks 1.211       Low
cufflinks 2.287       High
cufflinks 1.665        
cufflinks 1.541        

0 Strain