Gene : Glyma.18G221300 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  2213
Name:  ? Glyma.18G221300 Secondary Identifier:  ? PAC:30557643
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G221300 0.5kb upstream 0.5kb upstream 2167 true Chr18: 50849024-50851190 Glycine max
Glyma.18G221300 0.5kb upstream 0.5kb upstream 500 false Chr18: 50849024-50849523 Glycine max
Glyma.18G221300 0.5kb downstream 0.5kb downstream 2167 true Chr18: 50849524-50851690 Glycine max
Glyma.18G221300 0.5kb downstream 0.5kb downstream 500 false Chr18: 50851191-50851690 Glycine max
Glyma.18G221300 1.0kb upstream 1.0kb upstream 2667 true Chr18: 50848524-50851190 Glycine max
Glyma.18G221300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50848524-50849523 Glycine max
Glyma.18G221300 1.0kb downstream 1.0kb downstream 2667 true Chr18: 50849524-50852190 Glycine max
Glyma.18G221300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50851191-50852190 Glycine max
Glyma.18G221300 2.0kb upstream 2.0kb upstream 3667 true Chr18: 50847524-50851190 Glycine max
Glyma.18G221300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50847524-50849523 Glycine max
Glyma.18G221300 2.0kb downstream 2.0kb downstream 3667 true Chr18: 50849524-50853190 Glycine max
Glyma.18G221300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50851191-50853190 Glycine max
Glyma.18G221300 5.0kb upstream 5.0kb upstream 6667 true Chr18: 50844524-50851190 Glycine max
Glyma.18G221300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50844524-50849523 Glycine max
Glyma.18G221300 5.0kb downstream 5.0kb downstream 6667 true Chr18: 50849524-50856190 Glycine max
Glyma.18G221300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50851191-50856190 Glycine max
Glyma.18G221300 10.0kb upstream 10.0kb upstream 11667 true Chr18: 50839524-50851190 Glycine max
Glyma.18G221300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50839524-50849523 Glycine max
Glyma.18G221300 10.0kb downstream 10.0kb downstream 11667 true Chr18: 50849524-50861190 Glycine max
Glyma.18G221300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50851191-50861190 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311197 5265 Fabidae View MSA
124070912 5270 Rosid View MSA
123743225 5271 Pentapetalae View MSA
122795677 5272 Eudicot View MSA
122049711 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.19771 0.0 7.21607    
cufflinks 3.39826 0.0 10.4631    
cufflinks 37.3348 0.0 102.243 High High
cufflinks 1.69465 0.0 5.72791    
cufflinks 0.754544 0.0 2.73968    
cufflinks 4.30312 0.0 12.8491    
cufflinks 0.154557 0.0 0.604517 Low Low
cufflinks 5.41348 0.0 15.6017    
cufflinks 1.99802 0.0 6.62801    
cufflinks 0.116        
cufflinks 18.972     High High
cufflinks 15.843     High High
cufflinks 0.071     Low Low
cufflinks 0.135        
cufflinks 10.597     High High
cufflinks 0.025     Low Low
cufflinks 1.592        
cufflinks 1.727        
cufflinks 1.097        
cufflinks 0.167        
cufflinks 14.022     High High
cufflinks 0.203        
cufflinks 0.148        
cufflinks 15.033     High High
cufflinks 0.093     Low  
cufflinks 11.423     High High

0 Strain