Gene : Glyma.18G224000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10774:SF51 - C2 CALCIUM/LIPID-BINDING ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE-RELATED Genomic Order:  2240
Name:  ? Glyma.18G224000 Secondary Identifier:  ? PAC:30557632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G224000 0.5kb upstream 0.5kb upstream 17716 true Chr18: 51153208-51170923 Glycine max
Glyma.18G224000 0.5kb upstream 0.5kb upstream 500 false Chr18: 51153208-51153707 Glycine max
Glyma.18G224000 0.5kb downstream 0.5kb downstream 17716 true Chr18: 51153708-51171423 Glycine max
Glyma.18G224000 0.5kb downstream 0.5kb downstream 500 false Chr18: 51170924-51171423 Glycine max
Glyma.18G224000 1.0kb upstream 1.0kb upstream 18216 true Chr18: 51152708-51170923 Glycine max
Glyma.18G224000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 51152708-51153707 Glycine max
Glyma.18G224000 1.0kb downstream 1.0kb downstream 18216 true Chr18: 51153708-51171923 Glycine max
Glyma.18G224000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 51170924-51171923 Glycine max
Glyma.18G224000 2.0kb upstream 2.0kb upstream 19216 true Chr18: 51151708-51170923 Glycine max
Glyma.18G224000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 51151708-51153707 Glycine max
Glyma.18G224000 2.0kb downstream 2.0kb downstream 19216 true Chr18: 51153708-51172923 Glycine max
Glyma.18G224000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 51170924-51172923 Glycine max
Glyma.18G224000 5.0kb upstream 5.0kb upstream 22216 true Chr18: 51148708-51170923 Glycine max
Glyma.18G224000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 51148708-51153707 Glycine max
Glyma.18G224000 5.0kb downstream 5.0kb downstream 22216 true Chr18: 51153708-51175923 Glycine max
Glyma.18G224000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 51170924-51175923 Glycine max
Glyma.18G224000 10.0kb upstream 10.0kb upstream 27216 true Chr18: 51143708-51170923 Glycine max
Glyma.18G224000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 51143708-51153707 Glycine max
Glyma.18G224000 10.0kb downstream 10.0kb downstream 27216 true Chr18: 51153708-51180923 Glycine max
Glyma.18G224000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 51170924-51180923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310033 5265 Fabidae View MSA
124067167 5270 Rosid View MSA
123748686 5271 Pentapetalae View MSA
122791345 5272 Eudicot View MSA
122044587 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346327 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.221776 0.0 1.1142   Low
cufflinks 0.760098 0.0 3.32288    
cufflinks 0.722816 0.0 3.14302    
cufflinks 1.08298 0.0 4.21959    
cufflinks 1.59671 0.0 5.64382    
cufflinks 6.37079 0.0 19.9844   High
cufflinks 2.75553 0.0 8.28657   High
cufflinks 0.395043 0.0 1.87237    
cufflinks 0.676935 0.0 2.93971    
cufflinks 0.048     Low Low
cufflinks 0.144        
cufflinks 0.158        
cufflinks 0.302       High
cufflinks 0.353       High
cufflinks 0.055       Low
cufflinks 0.075     Low  
cufflinks 0.081        
cufflinks 0.465       High
cufflinks 0.195        
cufflinks 0.069     Low  
cufflinks 0.145        
cufflinks 0.074     Low  
cufflinks 0.077     Low  
cufflinks 0.219        
cufflinks 0.065     Low  
cufflinks 0.145        

0 Strain