Gene : Glyma.18G215700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11452:SF18 - ALPHA-GALACTOSIDASE 1 Genomic Order:  2157
Name:  ? Glyma.18G215700 Secondary Identifier:  ? PAC:30556342
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1301 Glycine max pathologic  
Gmax PWY-6527 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G215700 0.5kb upstream 0.5kb upstream 4399 true Chr18: 50279288-50283686 Glycine max
Glyma.18G215700 0.5kb upstream 0.5kb upstream 500 false Chr18: 50279288-50279787 Glycine max
Glyma.18G215700 0.5kb downstream 0.5kb downstream 4399 true Chr18: 50279788-50284186 Glycine max
Glyma.18G215700 0.5kb downstream 0.5kb downstream 500 false Chr18: 50283687-50284186 Glycine max
Glyma.18G215700 1.0kb upstream 1.0kb upstream 4899 true Chr18: 50278788-50283686 Glycine max
Glyma.18G215700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50278788-50279787 Glycine max
Glyma.18G215700 1.0kb downstream 1.0kb downstream 4899 true Chr18: 50279788-50284686 Glycine max
Glyma.18G215700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50283687-50284686 Glycine max
Glyma.18G215700 2.0kb upstream 2.0kb upstream 5899 true Chr18: 50277788-50283686 Glycine max
Glyma.18G215700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50277788-50279787 Glycine max
Glyma.18G215700 2.0kb downstream 2.0kb downstream 5899 true Chr18: 50279788-50285686 Glycine max
Glyma.18G215700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50283687-50285686 Glycine max
Glyma.18G215700 5.0kb upstream 5.0kb upstream 8899 true Chr18: 50274788-50283686 Glycine max
Glyma.18G215700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50274788-50279787 Glycine max
Glyma.18G215700 5.0kb downstream 5.0kb downstream 8899 true Chr18: 50279788-50288686 Glycine max
Glyma.18G215700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50283687-50288686 Glycine max
Glyma.18G215700 10.0kb upstream 10.0kb upstream 13899 true Chr18: 50269788-50283686 Glycine max
Glyma.18G215700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50269788-50279787 Glycine max
Glyma.18G215700 10.0kb downstream 10.0kb downstream 13899 true Chr18: 50279788-50293686 Glycine max
Glyma.18G215700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50283687-50293686 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315044 5265 Fabidae View MSA
124069485 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10089 0.0 7.78791   Low
cufflinks 16.9169 0.0 70.146    
cufflinks 6.12749 0.0 20.7815    
cufflinks 37.7104 0.0 166.641 High High
cufflinks 20.9427 0.0 82.0428 High  
cufflinks 10.9177 0.0 44.1923    
cufflinks 67.2112 0.0 320.06 High High
cufflinks 5.42947 0.0 19.2653    
cufflinks 7.17196 0.0 23.7389    
cufflinks 3.608        
cufflinks 0.443       Low
cufflinks 3.654        
cufflinks 5.486        
cufflinks 2.768        
cufflinks 0.111       Low
cufflinks 7.651     High  
cufflinks 0.597        
cufflinks 3.29        
cufflinks 3.993        
cufflinks 6.051        
cufflinks 0.686        
cufflinks 6.803        
cufflinks 6.923        
cufflinks 0.156       Low
cufflinks 6.464        
cufflinks 0.851        

0 Strain