Gene : Glyma.18G216900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23091:SF229 - ACETYLTRANSFERASE NSI Genomic Order:  2169
Name:  ? Glyma.18G216900 Secondary Identifier:  ? PAC:30555841
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G216900 0.5kb upstream 0.5kb upstream 4955 true Chr18: 50401263-50406217 Glycine max
Glyma.18G216900 0.5kb upstream 0.5kb upstream 500 false Chr18: 50401263-50401762 Glycine max
Glyma.18G216900 0.5kb downstream 0.5kb downstream 4955 true Chr18: 50401763-50406717 Glycine max
Glyma.18G216900 0.5kb downstream 0.5kb downstream 500 false Chr18: 50406218-50406717 Glycine max
Glyma.18G216900 1.0kb upstream 1.0kb upstream 5455 true Chr18: 50400763-50406217 Glycine max
Glyma.18G216900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50400763-50401762 Glycine max
Glyma.18G216900 1.0kb downstream 1.0kb downstream 5455 true Chr18: 50401763-50407217 Glycine max
Glyma.18G216900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50406218-50407217 Glycine max
Glyma.18G216900 2.0kb upstream 2.0kb upstream 6455 true Chr18: 50399763-50406217 Glycine max
Glyma.18G216900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50399763-50401762 Glycine max
Glyma.18G216900 2.0kb downstream 2.0kb downstream 6455 true Chr18: 50401763-50408217 Glycine max
Glyma.18G216900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50406218-50408217 Glycine max
Glyma.18G216900 5.0kb upstream 5.0kb upstream 9455 true Chr18: 50396763-50406217 Glycine max
Glyma.18G216900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50396763-50401762 Glycine max
Glyma.18G216900 5.0kb downstream 5.0kb downstream 9455 true Chr18: 50401763-50411217 Glycine max
Glyma.18G216900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50406218-50411217 Glycine max
Glyma.18G216900 10.0kb upstream 10.0kb upstream 14455 true Chr18: 50391763-50406217 Glycine max
Glyma.18G216900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50391763-50401762 Glycine max
Glyma.18G216900 10.0kb downstream 10.0kb downstream 14455 true Chr18: 50401763-50416217 Glycine max
Glyma.18G216900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50406218-50416217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305931 5265 Fabidae View MSA
124073792 5270 Rosid View MSA
123739375 5271 Pentapetalae View MSA
122789117 5272 Eudicot View MSA
122047128 5273 Angiosperm View MSA
123428893 5275 Viridiplantae View MSA
121347685 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.7229 0.0 20.8549   High
cufflinks 0.759223 0.0 4.66182    
cufflinks 2.64824 0.0 15.6343   High
cufflinks 0.556772 0.0 3.74888    
cufflinks 0.630301 0.0 4.45288    
cufflinks 1.47509 0.0 8.89124    
cufflinks 2.1202 0.0 10.8702    
cufflinks 0.43767 0.0 2.19823    
cufflinks 0.309514 0.0 1.57384   Low
cufflinks 0.059     Low  
cufflinks 0.024     Low  
cufflinks 0.168        
cufflinks 0.046     Low  
cufflinks 0.035     Low  
cufflinks 0.009     Low Low
cufflinks 0.226        
cufflinks 0.035     Low  
cufflinks 0.15        
cufflinks 0.075     Low  
cufflinks 0.399       High
cufflinks 0.022     Low Low
cufflinks 0.242       High
cufflinks 0.262       High
cufflinks 0.044     Low  
cufflinks 0.345       High
cufflinks 0.014     Low Low

0 Strain