Gene : Glyma.18G217800 G. max Wm82.a2.v1
Defline:  (1 of 14) PF06697 - Protein of unknown function (DUF1191) (DUF1191) Genomic Order:  2178
Name:  ? Glyma.18G217800 Secondary Identifier:  ? PAC:30556345
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G217800 0.5kb upstream 0.5kb upstream 3272 true Chr18: 50489993-50493264 Glycine max
Glyma.18G217800 0.5kb upstream 0.5kb upstream 500 false Chr18: 50492765-50493264 Glycine max
Glyma.18G217800 0.5kb downstream 0.5kb downstream 3272 true Chr18: 50489493-50492764 Glycine max
Glyma.18G217800 0.5kb downstream 0.5kb downstream 500 false Chr18: 50489493-50489992 Glycine max
Glyma.18G217800 1.0kb upstream 1.0kb upstream 3772 true Chr18: 50489993-50493764 Glycine max
Glyma.18G217800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50492765-50493764 Glycine max
Glyma.18G217800 1.0kb downstream 1.0kb downstream 3772 true Chr18: 50488993-50492764 Glycine max
Glyma.18G217800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50488993-50489992 Glycine max
Glyma.18G217800 2.0kb upstream 2.0kb upstream 4772 true Chr18: 50489993-50494764 Glycine max
Glyma.18G217800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50492765-50494764 Glycine max
Glyma.18G217800 2.0kb downstream 2.0kb downstream 4772 true Chr18: 50487993-50492764 Glycine max
Glyma.18G217800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50487993-50489992 Glycine max
Glyma.18G217800 5.0kb upstream 5.0kb upstream 7772 true Chr18: 50489993-50497764 Glycine max
Glyma.18G217800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50492765-50497764 Glycine max
Glyma.18G217800 5.0kb downstream 5.0kb downstream 7772 true Chr18: 50484993-50492764 Glycine max
Glyma.18G217800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50484993-50489992 Glycine max
Glyma.18G217800 10.0kb upstream 10.0kb upstream 12772 true Chr18: 50489993-50502764 Glycine max
Glyma.18G217800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50492765-50502764 Glycine max
Glyma.18G217800 10.0kb downstream 10.0kb downstream 12772 true Chr18: 50479993-50492764 Glycine max
Glyma.18G217800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50479993-50489992 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041468 5273 Angiosperm View MSA
122309394 5265 Fabidae View MSA
124061363 5270 Rosid View MSA
123747246 5271 Pentapetalae View MSA
122795856 5272 Eudicot View MSA
121351350 5274 Embryophyte View MSA
123382132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.525869 0.0 1.89622   Low
cufflinks 4.57953 0.0 12.8195    
cufflinks 0.589677 0.0 2.10272   Low
cufflinks 3.08544 0.0 9.03054    
cufflinks 3.00563 0.0 8.8761    
cufflinks 2.62811 0.0 7.87516    
cufflinks 4.91382 0.0 13.6858   High
cufflinks 2.01829 0.0 6.26255    
cufflinks 2.04086 0.0 6.33359    
cufflinks 5.041        
cufflinks 0.082       Low
cufflinks 1.996        
cufflinks 4.593        
cufflinks 7.372     High High
cufflinks 0.192       Low
cufflinks 2.846        
cufflinks 0.547        
cufflinks 4.079        
cufflinks 3.603        
cufflinks 2.286        
cufflinks 0.126       Low
cufflinks 2.727        
cufflinks 5.132        
cufflinks 0.095       Low
cufflinks 2.276        
cufflinks 0.352        

0 Strain