Gene : Glyma.18G218700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31852:SF3 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY Genomic Order:  2187
Name:  ? Glyma.18G218700 Secondary Identifier:  ? PAC:30554846
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G218700 0.5kb upstream 0.5kb upstream 1692 true Chr18: 50553919-50555610 Glycine max
Glyma.18G218700 0.5kb upstream 0.5kb upstream 500 false Chr18: 50555111-50555610 Glycine max
Glyma.18G218700 0.5kb downstream 0.5kb downstream 1692 true Chr18: 50553419-50555110 Glycine max
Glyma.18G218700 0.5kb downstream 0.5kb downstream 500 false Chr18: 50553419-50553918 Glycine max
Glyma.18G218700 1.0kb upstream 1.0kb upstream 2192 true Chr18: 50553919-50556110 Glycine max
Glyma.18G218700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50555111-50556110 Glycine max
Glyma.18G218700 1.0kb downstream 1.0kb downstream 2192 true Chr18: 50552919-50555110 Glycine max
Glyma.18G218700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50552919-50553918 Glycine max
Glyma.18G218700 2.0kb upstream 2.0kb upstream 3192 true Chr18: 50553919-50557110 Glycine max
Glyma.18G218700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50555111-50557110 Glycine max
Glyma.18G218700 2.0kb downstream 2.0kb downstream 3192 true Chr18: 50551919-50555110 Glycine max
Glyma.18G218700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50551919-50553918 Glycine max
Glyma.18G218700 5.0kb upstream 5.0kb upstream 6192 true Chr18: 50553919-50560110 Glycine max
Glyma.18G218700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50555111-50560110 Glycine max
Glyma.18G218700 5.0kb downstream 5.0kb downstream 6192 true Chr18: 50548919-50555110 Glycine max
Glyma.18G218700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50548919-50553918 Glycine max
Glyma.18G218700 10.0kb upstream 10.0kb upstream 11192 true Chr18: 50553919-50565110 Glycine max
Glyma.18G218700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50555111-50565110 Glycine max
Glyma.18G218700 10.0kb downstream 10.0kb downstream 11192 true Chr18: 50543919-50555110 Glycine max
Glyma.18G218700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50543919-50553918 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304918 5265 Fabidae View MSA
124061376 5270 Rosid View MSA
123743107 5271 Pentapetalae View MSA
122794839 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4878 0.0 62.8877 High High
cufflinks 3.02629 0.0 10.0536   Low
cufflinks 15.6319 0.0 42.449   High
cufflinks 8.3771 0.0 24.2228    
cufflinks 7.25513 0.0 21.4605    
cufflinks 8.91971 0.0 25.659    
cufflinks 7.59123 0.0 22.3176    
cufflinks 5.92193 0.0 17.8677    
cufflinks 5.58223 0.0 17.0151    
cufflinks 2.686        
cufflinks 0.017     Low Low
cufflinks 14.951     High  
cufflinks 2.632        
cufflinks 5.021        
cufflinks 0.271        
cufflinks 12.465     High  
cufflinks 0.373        
cufflinks 13.448     High  
cufflinks 3.134        
cufflinks 13.492     High  
cufflinks 0.015     Low Low
cufflinks 15.444     High  
cufflinks 8.12     High  
cufflinks 0.16        
cufflinks 12.528     High  
cufflinks 0.046     Low Low

0 Strain