Gene : Glyma.18G208800 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR31221:SF1 - WRKY TRANSCRIPTION FACTOR 1-RELATED Genomic Order:  2088
Name:  ? Glyma.18G208800 Secondary Identifier:  ? PAC:30554945
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G208800 0.5kb upstream 0.5kb upstream 4106 true Chr18: 49341357-49345462 Glycine max
Glyma.18G208800 0.5kb upstream 0.5kb upstream 500 false Chr18: 49344963-49345462 Glycine max
Glyma.18G208800 0.5kb downstream 0.5kb downstream 4106 true Chr18: 49340857-49344962 Glycine max
Glyma.18G208800 0.5kb downstream 0.5kb downstream 500 false Chr18: 49340857-49341356 Glycine max
Glyma.18G208800 1.0kb upstream 1.0kb upstream 4606 true Chr18: 49341357-49345962 Glycine max
Glyma.18G208800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 49344963-49345962 Glycine max
Glyma.18G208800 1.0kb downstream 1.0kb downstream 4606 true Chr18: 49340357-49344962 Glycine max
Glyma.18G208800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 49340357-49341356 Glycine max
Glyma.18G208800 2.0kb upstream 2.0kb upstream 5606 true Chr18: 49341357-49346962 Glycine max
Glyma.18G208800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 49344963-49346962 Glycine max
Glyma.18G208800 2.0kb downstream 2.0kb downstream 5606 true Chr18: 49339357-49344962 Glycine max
Glyma.18G208800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 49339357-49341356 Glycine max
Glyma.18G208800 5.0kb upstream 5.0kb upstream 8606 true Chr18: 49341357-49349962 Glycine max
Glyma.18G208800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 49344963-49349962 Glycine max
Glyma.18G208800 5.0kb downstream 5.0kb downstream 8606 true Chr18: 49336357-49344962 Glycine max
Glyma.18G208800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 49336357-49341356 Glycine max
Glyma.18G208800 10.0kb upstream 10.0kb upstream 13606 true Chr18: 49341357-49354962 Glycine max
Glyma.18G208800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 49344963-49354962 Glycine max
Glyma.18G208800 10.0kb downstream 10.0kb downstream 13606 true Chr18: 49331357-49344962 Glycine max
Glyma.18G208800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 49331357-49341356 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296208 5265 Fabidae View MSA
124071256 5270 Rosid View MSA
123740881 5271 Pentapetalae View MSA
122792726 5272 Eudicot View MSA
122046971 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.04245 0.0 30.6788   High
cufflinks 0.646347 0.0 3.56636    
cufflinks 3.48 0.0 11.8269    
cufflinks 0.0679703 0.0 0.268174 Low Low
cufflinks 1.31343 0.0 6.11456    
cufflinks 14.9671 0.0 62.9799   High
cufflinks 0.0845068 0.0 0.334143 Low Low
cufflinks 0.276267 0.0 1.337    
cufflinks 2.59739 0.0 12.2511    
cufflinks 1.13        
cufflinks 3.472       High
cufflinks 1.075        
cufflinks 1.256        
cufflinks 0.215       Low
cufflinks 2.623       High
cufflinks 0.431        
cufflinks 1.817        
cufflinks 0.219       Low
cufflinks 0.628        
cufflinks 0.152       Low
cufflinks 0.974        
cufflinks 0.734        
cufflinks 0.543        
cufflinks 2.395       High
cufflinks 0.279       Low
cufflinks 1.328        

0 Strain