Gene : Glyma.18G211300 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR33257:SF5 - EXPRESSED PROTEIN Genomic Order:  2113
Name:  ? Glyma.18G211300 Secondary Identifier:  ? PAC:30557058
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G211300 0.5kb upstream 0.5kb upstream 1085 true Chr18: 49794388-49795472 Glycine max
Glyma.18G211300 0.5kb upstream 0.5kb upstream 500 false Chr18: 49794973-49795472 Glycine max
Glyma.18G211300 0.5kb downstream 0.5kb downstream 1085 true Chr18: 49793888-49794972 Glycine max
Glyma.18G211300 0.5kb downstream 0.5kb downstream 500 false Chr18: 49793888-49794387 Glycine max
Glyma.18G211300 1.0kb upstream 1.0kb upstream 1585 true Chr18: 49794388-49795972 Glycine max
Glyma.18G211300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 49794973-49795972 Glycine max
Glyma.18G211300 1.0kb downstream 1.0kb downstream 1585 true Chr18: 49793388-49794972 Glycine max
Glyma.18G211300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 49793388-49794387 Glycine max
Glyma.18G211300 2.0kb upstream 2.0kb upstream 2585 true Chr18: 49794388-49796972 Glycine max
Glyma.18G211300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 49794973-49796972 Glycine max
Glyma.18G211300 2.0kb downstream 2.0kb downstream 2585 true Chr18: 49792388-49794972 Glycine max
Glyma.18G211300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 49792388-49794387 Glycine max
Glyma.18G211300 5.0kb upstream 5.0kb upstream 5585 true Chr18: 49794388-49799972 Glycine max
Glyma.18G211300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 49794973-49799972 Glycine max
Glyma.18G211300 5.0kb downstream 5.0kb downstream 5585 true Chr18: 49789388-49794972 Glycine max
Glyma.18G211300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 49789388-49794387 Glycine max
Glyma.18G211300 10.0kb upstream 10.0kb upstream 10585 true Chr18: 49794388-49804972 Glycine max
Glyma.18G211300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 49794973-49804972 Glycine max
Glyma.18G211300 10.0kb downstream 10.0kb downstream 10585 true Chr18: 49784388-49794972 Glycine max
Glyma.18G211300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 49784388-49794387 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310876 5265 Fabidae View MSA
124069444 5270 Rosid View MSA
123743182 5271 Pentapetalae View MSA
122790998 5272 Eudicot View MSA
122050526 5273 Angiosperm View MSA
121311968 5274 Embryophyte View MSA
123349191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.8849 0.0 50.3727    
cufflinks 6.93632 0.0 23.2579    
cufflinks 6.93833 0.0 23.2353    
cufflinks 1.21694 0.0 4.59759   Low
cufflinks 7.29901 0.0 24.2384    
cufflinks 9.97704 0.0 32.0322    
cufflinks 16.7391 0.0 49.5714    
cufflinks 0.548091 0.0 2.14005   Low
cufflinks 6.61377 0.0 22.2153    
cufflinks 1.005        
cufflinks 0.394       Low
cufflinks 4.884        
cufflinks 11.601     High  
cufflinks 8.029     High  
cufflinks 0.348       Low
cufflinks 33.763     High High
cufflinks 0.424       Low
cufflinks 6.315        
cufflinks 4.225        
cufflinks 51.861     High High
cufflinks 0.479       Low
cufflinks 51.27     High High
cufflinks 40.952     High High
cufflinks 1.202        
cufflinks 37.082     High High
cufflinks 0.644        

0 Strain