Gene : Glyma.18G211500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  2115
Name:  ? Glyma.18G211500 Secondary Identifier:  ? PAC:30554567
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6842 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G211500 0.5kb upstream 0.5kb upstream 3301 true Chr18: 49811564-49814864 Glycine max
Glyma.18G211500 0.5kb upstream 0.5kb upstream 500 false Chr18: 49811564-49812063 Glycine max
Glyma.18G211500 0.5kb downstream 0.5kb downstream 3301 true Chr18: 49812064-49815364 Glycine max
Glyma.18G211500 0.5kb downstream 0.5kb downstream 500 false Chr18: 49814865-49815364 Glycine max
Glyma.18G211500 1.0kb upstream 1.0kb upstream 3801 true Chr18: 49811064-49814864 Glycine max
Glyma.18G211500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 49811064-49812063 Glycine max
Glyma.18G211500 1.0kb downstream 1.0kb downstream 3801 true Chr18: 49812064-49815864 Glycine max
Glyma.18G211500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 49814865-49815864 Glycine max
Glyma.18G211500 2.0kb upstream 2.0kb upstream 4801 true Chr18: 49810064-49814864 Glycine max
Glyma.18G211500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 49810064-49812063 Glycine max
Glyma.18G211500 2.0kb downstream 2.0kb downstream 4801 true Chr18: 49812064-49816864 Glycine max
Glyma.18G211500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 49814865-49816864 Glycine max
Glyma.18G211500 5.0kb upstream 5.0kb upstream 7801 true Chr18: 49807064-49814864 Glycine max
Glyma.18G211500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 49807064-49812063 Glycine max
Glyma.18G211500 5.0kb downstream 5.0kb downstream 7801 true Chr18: 49812064-49819864 Glycine max
Glyma.18G211500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 49814865-49819864 Glycine max
Glyma.18G211500 10.0kb upstream 10.0kb upstream 12801 true Chr18: 49802064-49814864 Glycine max
Glyma.18G211500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 49802064-49812063 Glycine max
Glyma.18G211500 10.0kb downstream 10.0kb downstream 12801 true Chr18: 49812064-49824864 Glycine max
Glyma.18G211500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 49814865-49824864 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122242798 5265 Fabidae Singleton cluster - no MSA
123987434 5270 Rosid Singleton cluster - no MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.011     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.064     Low High
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain