Gene : Glyma.18G213500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12668:SF19 - NON-GREEN PLASTID INNER ENVELOPE MEMBRANE PROTEIN-RELATED Genomic Order:  2135
Name:  ? Glyma.18G213500 Secondary Identifier:  ? PAC:30555750
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G213500 0.5kb upstream 0.5kb upstream 6147 true Chr18: 50044567-50050713 Glycine max
Glyma.18G213500 0.5kb upstream 0.5kb upstream 500 false Chr18: 50050214-50050713 Glycine max
Glyma.18G213500 0.5kb downstream 0.5kb downstream 6147 true Chr18: 50044067-50050213 Glycine max
Glyma.18G213500 0.5kb downstream 0.5kb downstream 500 false Chr18: 50044067-50044566 Glycine max
Glyma.18G213500 1.0kb upstream 1.0kb upstream 6647 true Chr18: 50044567-50051213 Glycine max
Glyma.18G213500 1.0kb upstream 1.0kb upstream 1000 false Chr18: 50050214-50051213 Glycine max
Glyma.18G213500 1.0kb downstream 1.0kb downstream 6647 true Chr18: 50043567-50050213 Glycine max
Glyma.18G213500 1.0kb downstream 1.0kb downstream 1000 false Chr18: 50043567-50044566 Glycine max
Glyma.18G213500 2.0kb upstream 2.0kb upstream 7647 true Chr18: 50044567-50052213 Glycine max
Glyma.18G213500 2.0kb upstream 2.0kb upstream 2000 false Chr18: 50050214-50052213 Glycine max
Glyma.18G213500 2.0kb downstream 2.0kb downstream 7647 true Chr18: 50042567-50050213 Glycine max
Glyma.18G213500 2.0kb downstream 2.0kb downstream 2000 false Chr18: 50042567-50044566 Glycine max
Glyma.18G213500 5.0kb upstream 5.0kb upstream 10647 true Chr18: 50044567-50055213 Glycine max
Glyma.18G213500 5.0kb upstream 5.0kb upstream 5000 false Chr18: 50050214-50055213 Glycine max
Glyma.18G213500 5.0kb downstream 5.0kb downstream 10647 true Chr18: 50039567-50050213 Glycine max
Glyma.18G213500 5.0kb downstream 5.0kb downstream 5000 false Chr18: 50039567-50044566 Glycine max
Glyma.18G213500 10.0kb upstream 10.0kb upstream 15647 true Chr18: 50044567-50060213 Glycine max
Glyma.18G213500 10.0kb upstream 10.0kb upstream 10000 false Chr18: 50050214-50060213 Glycine max
Glyma.18G213500 10.0kb downstream 10.0kb downstream 15647 true Chr18: 50034567-50050213 Glycine max
Glyma.18G213500 10.0kb downstream 10.0kb downstream 10000 false Chr18: 50034567-50044566 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305049 5265 Fabidae View MSA
124066225 5270 Rosid View MSA
123738193 5271 Pentapetalae View MSA
122789791 5272 Eudicot View MSA
122046844 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5682 0.0 88.5974   High
cufflinks 12.4733 0.0 54.1446    
cufflinks 11.3123 0.0 48.7573    
cufflinks 14.3918 0.0 66.3326    
cufflinks 15.934 0.0 72.082    
cufflinks 7.29168 0.0 35.3859   Low
cufflinks 16.0021 0.0 66.6993    
cufflinks 14.0869 0.0 60.7316    
cufflinks 13.1467 0.0 56.0138    
cufflinks 1.049        
cufflinks 0.351       Low
cufflinks 0.984        
cufflinks 1.361       High
cufflinks 1.557       High
cufflinks 0.521       Low
cufflinks 1.144        
cufflinks 0.544        
cufflinks 1.135        
cufflinks 1.276        
cufflinks 0.976        
cufflinks 0.438       Low
cufflinks 0.961        
cufflinks 1.324        
cufflinks 0.439       Low
cufflinks 1.09        
cufflinks 0.547        

0 Strain