Gene : Glyma.18G201600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24078:SF298 - HEAT SHOCK PROTEIN 40-LIKE Genomic Order:  2016
Name:  ? Glyma.18G201600 Secondary Identifier:  ? PAC:30555338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G201600 0.5kb upstream 0.5kb upstream 5041 true Chr18: 48163234-48168274 Glycine max
Glyma.18G201600 0.5kb upstream 0.5kb upstream 500 false Chr18: 48163234-48163733 Glycine max
Glyma.18G201600 0.5kb downstream 0.5kb downstream 5041 true Chr18: 48163734-48168774 Glycine max
Glyma.18G201600 0.5kb downstream 0.5kb downstream 500 false Chr18: 48168275-48168774 Glycine max
Glyma.18G201600 1.0kb upstream 1.0kb upstream 5541 true Chr18: 48162734-48168274 Glycine max
Glyma.18G201600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 48162734-48163733 Glycine max
Glyma.18G201600 1.0kb downstream 1.0kb downstream 5541 true Chr18: 48163734-48169274 Glycine max
Glyma.18G201600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 48168275-48169274 Glycine max
Glyma.18G201600 2.0kb upstream 2.0kb upstream 6541 true Chr18: 48161734-48168274 Glycine max
Glyma.18G201600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 48161734-48163733 Glycine max
Glyma.18G201600 2.0kb downstream 2.0kb downstream 6541 true Chr18: 48163734-48170274 Glycine max
Glyma.18G201600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 48168275-48170274 Glycine max
Glyma.18G201600 5.0kb upstream 5.0kb upstream 9541 true Chr18: 48158734-48168274 Glycine max
Glyma.18G201600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 48158734-48163733 Glycine max
Glyma.18G201600 5.0kb downstream 5.0kb downstream 9541 true Chr18: 48163734-48173274 Glycine max
Glyma.18G201600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 48168275-48173274 Glycine max
Glyma.18G201600 10.0kb upstream 10.0kb upstream 14541 true Chr18: 48153734-48168274 Glycine max
Glyma.18G201600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 48153734-48163733 Glycine max
Glyma.18G201600 10.0kb downstream 10.0kb downstream 14541 true Chr18: 48163734-48178274 Glycine max
Glyma.18G201600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48168275-48178274 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309230 5265 Fabidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.53677 0.0 18.5106   Low
cufflinks 9.29435 0.0 25.5171    
cufflinks 11.952 0.0 32.2221   High
cufflinks 8.90248 0.0 24.4773    
cufflinks 6.67638 0.0 18.8615   Low
cufflinks 8.78025 0.0 24.1652    
cufflinks 11.106 0.0 30.1225   High
cufflinks 7.67876 0.0 21.397    
cufflinks 7.01945 0.0 19.7313    
cufflinks 1.859       Low
cufflinks 4.366        
cufflinks 4.707       High
cufflinks 2.488       Low
cufflinks 3.095        
cufflinks 2.348       Low
cufflinks 3.518        
cufflinks 2.853        
cufflinks 3.125        
cufflinks 3.568        
cufflinks 4.45        
cufflinks 3.752        
cufflinks 4.46        
cufflinks 3.92        
cufflinks 4.867       High
cufflinks 3.862        
cufflinks 2.919        

0 Strain