Gene : Glyma.18G202400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10032:SF215 - TRIHELIX TRANSCRIPTION FACTOR GT-3A-RELATED Genomic Order:  2024
Name:  ? Glyma.18G202400 Secondary Identifier:  ? PAC:30557243
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G202400 0.5kb upstream 0.5kb upstream 3061 true Chr18: 48321615-48324675 Glycine max
Glyma.18G202400 0.5kb upstream 0.5kb upstream 500 false Chr18: 48321615-48322114 Glycine max
Glyma.18G202400 0.5kb downstream 0.5kb downstream 3061 true Chr18: 48322115-48325175 Glycine max
Glyma.18G202400 0.5kb downstream 0.5kb downstream 500 false Chr18: 48324676-48325175 Glycine max
Glyma.18G202400 1.0kb upstream 1.0kb upstream 3561 true Chr18: 48321115-48324675 Glycine max
Glyma.18G202400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 48321115-48322114 Glycine max
Glyma.18G202400 1.0kb downstream 1.0kb downstream 3561 true Chr18: 48322115-48325675 Glycine max
Glyma.18G202400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 48324676-48325675 Glycine max
Glyma.18G202400 2.0kb upstream 2.0kb upstream 4561 true Chr18: 48320115-48324675 Glycine max
Glyma.18G202400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 48320115-48322114 Glycine max
Glyma.18G202400 2.0kb downstream 2.0kb downstream 4561 true Chr18: 48322115-48326675 Glycine max
Glyma.18G202400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 48324676-48326675 Glycine max
Glyma.18G202400 5.0kb upstream 5.0kb upstream 7561 true Chr18: 48317115-48324675 Glycine max
Glyma.18G202400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 48317115-48322114 Glycine max
Glyma.18G202400 5.0kb downstream 5.0kb downstream 7561 true Chr18: 48322115-48329675 Glycine max
Glyma.18G202400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 48324676-48329675 Glycine max
Glyma.18G202400 10.0kb upstream 10.0kb upstream 12561 true Chr18: 48312115-48324675 Glycine max
Glyma.18G202400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 48312115-48322114 Glycine max
Glyma.18G202400 10.0kb downstream 10.0kb downstream 12561 true Chr18: 48322115-48334675 Glycine max
Glyma.18G202400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48324676-48334675 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242392 5265 Fabidae Singleton cluster - no MSA
124061042 5270 Rosid View MSA
123753444 5271 Pentapetalae View MSA
122785862 5272 Eudicot View MSA
122041695 5273 Angiosperm View MSA
121348900 5274 Embryophyte View MSA
123381067 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16697 0.0 5.02856   High
cufflinks 0.0672688 0.0 0.273444 Low Low
cufflinks 0.343868 0.0 1.71761    
cufflinks 0.435853 0.0 2.13521    
cufflinks 0.365428 0.0 1.81501    
cufflinks 0.716681 0.0 4.33753    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.20727 0.0 5.12338   High
cufflinks 0.496141 0.0 2.42179    
cufflinks 0.564        
cufflinks 6.839     High High
cufflinks 0.219        
cufflinks 0.224        
cufflinks 0.112        
cufflinks 2.791        
cufflinks 0.093     Low  
cufflinks 17.242     High High
cufflinks 0.016     Low Low
cufflinks 0.042     Low  
cufflinks 0.012     Low Low
cufflinks 3.976       High
cufflinks 0.075     Low  
cufflinks 0.189        
cufflinks 4.437       High
cufflinks 0.095     Low  
cufflinks 6.46     High High

0 Strain