Gene : Glyma.18G202800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10909:SF331 - ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  2028
Name:  ? Glyma.18G202800 Secondary Identifier:  ? PAC:30555025
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5136 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-6837 Glycine max pathologic  
Gmax PWY-735 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G202800 0.5kb upstream 0.5kb upstream 6290 true Chr18: 48394404-48400693 Glycine max
Glyma.18G202800 0.5kb upstream 0.5kb upstream 500 false Chr18: 48394404-48394903 Glycine max
Glyma.18G202800 0.5kb downstream 0.5kb downstream 6290 true Chr18: 48394904-48401193 Glycine max
Glyma.18G202800 0.5kb downstream 0.5kb downstream 500 false Chr18: 48400694-48401193 Glycine max
Glyma.18G202800 1.0kb upstream 1.0kb upstream 6790 true Chr18: 48393904-48400693 Glycine max
Glyma.18G202800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 48393904-48394903 Glycine max
Glyma.18G202800 1.0kb downstream 1.0kb downstream 6790 true Chr18: 48394904-48401693 Glycine max
Glyma.18G202800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 48400694-48401693 Glycine max
Glyma.18G202800 2.0kb upstream 2.0kb upstream 7790 true Chr18: 48392904-48400693 Glycine max
Glyma.18G202800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 48392904-48394903 Glycine max
Glyma.18G202800 2.0kb downstream 2.0kb downstream 7790 true Chr18: 48394904-48402693 Glycine max
Glyma.18G202800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 48400694-48402693 Glycine max
Glyma.18G202800 5.0kb upstream 5.0kb upstream 10790 true Chr18: 48389904-48400693 Glycine max
Glyma.18G202800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 48389904-48394903 Glycine max
Glyma.18G202800 5.0kb downstream 5.0kb downstream 10790 true Chr18: 48394904-48405693 Glycine max
Glyma.18G202800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 48400694-48405693 Glycine max
Glyma.18G202800 10.0kb upstream 10.0kb upstream 15790 true Chr18: 48384904-48400693 Glycine max
Glyma.18G202800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 48384904-48394903 Glycine max
Glyma.18G202800 10.0kb downstream 10.0kb downstream 15790 true Chr18: 48394904-48410693 Glycine max
Glyma.18G202800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48400694-48410693 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309589 5265 Fabidae View MSA
124065996 5270 Rosid View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37964 0.0 16.3973   High
cufflinks 1.05201 0.0 6.45656    
cufflinks 10.816 0.0 47.4237   High
cufflinks 0.714604 0.0 4.94646    
cufflinks 1.61333 0.0 12.0212    
cufflinks 2.15817 0.0 10.6865    
cufflinks 0.854965 0.0 5.07069    
cufflinks 0.708701 0.0 4.4486    
cufflinks 1.63041 0.0 8.39067    
cufflinks 0.034     Low Low
cufflinks 1.088       High
cufflinks 0.371        
cufflinks 0.04     Low Low
cufflinks 0.04     Low Low
cufflinks 0.163        
cufflinks 0.283        
cufflinks 0.199        
cufflinks 0.129        
cufflinks 0.112        
cufflinks 0.604       High
cufflinks 0.217        
cufflinks 0.2        
cufflinks 0.052     Low Low
cufflinks 0.715       High
cufflinks 0.513        
cufflinks 0.183        

0 Strain