Gene : Glyma.18G202900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22952//PTHR22952:SF145 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  2029
Name:  ? Glyma.18G202900 Secondary Identifier:  ? PAC:30558770
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G202900 0.5kb upstream 0.5kb upstream 1199 true Chr18: 48401099-48402297 Glycine max
Glyma.18G202900 0.5kb upstream 0.5kb upstream 500 false Chr18: 48401798-48402297 Glycine max
Glyma.18G202900 0.5kb downstream 0.5kb downstream 1199 true Chr18: 48400599-48401797 Glycine max
Glyma.18G202900 0.5kb downstream 0.5kb downstream 500 false Chr18: 48400599-48401098 Glycine max
Glyma.18G202900 1.0kb upstream 1.0kb upstream 1699 true Chr18: 48401099-48402797 Glycine max
Glyma.18G202900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 48401798-48402797 Glycine max
Glyma.18G202900 1.0kb downstream 1.0kb downstream 1699 true Chr18: 48400099-48401797 Glycine max
Glyma.18G202900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 48400099-48401098 Glycine max
Glyma.18G202900 2.0kb upstream 2.0kb upstream 2699 true Chr18: 48401099-48403797 Glycine max
Glyma.18G202900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 48401798-48403797 Glycine max
Glyma.18G202900 2.0kb downstream 2.0kb downstream 2699 true Chr18: 48399099-48401797 Glycine max
Glyma.18G202900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 48399099-48401098 Glycine max
Glyma.18G202900 5.0kb upstream 5.0kb upstream 5699 true Chr18: 48401099-48406797 Glycine max
Glyma.18G202900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 48401798-48406797 Glycine max
Glyma.18G202900 5.0kb downstream 5.0kb downstream 5699 true Chr18: 48396099-48401797 Glycine max
Glyma.18G202900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 48396099-48401098 Glycine max
Glyma.18G202900 10.0kb upstream 10.0kb upstream 10699 true Chr18: 48401099-48411797 Glycine max
Glyma.18G202900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 48401798-48411797 Glycine max
Glyma.18G202900 10.0kb downstream 10.0kb downstream 10699 true Chr18: 48391099-48401797 Glycine max
Glyma.18G202900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48391099-48401098 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308493 5265 Fabidae View MSA
124067478 5270 Rosid View MSA
123742632 5271 Pentapetalae View MSA
122797176 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.426498 0.0 1.65448   Low
cufflinks 1.69574 0.0 6.16555    
cufflinks 1.74574 0.0 6.3245    
cufflinks 0.558959 0.0 2.14187    
cufflinks 5.58185 0.0 17.9928   High
cufflinks 1.41275 0.0 5.18324    
cufflinks 5.46771 0.0 17.6486   High
cufflinks 0.322851 0.0 1.26475   Low
cufflinks 0.871712 0.0 3.27495    
cufflinks 1.407        
cufflinks 0.029     Low Low
cufflinks 1.186        
cufflinks 3.373        
cufflinks 13.801     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.541        
cufflinks 0.062     Low Low
cufflinks 3.783       High
cufflinks 3.206        
cufflinks 0.609        
cufflinks 0.09       Low
cufflinks 0.621        
cufflinks 0.951        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.471        
cufflinks 0.329        

0 Strain