Gene : Glyma.18G204800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11730:SF38 - AMMONIUM TRANSPORTER 2 Genomic Order:  2048
Name:  ? Glyma.18G204800 Secondary Identifier:  ? PAC:30557900
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G204800 0.5kb upstream 0.5kb upstream 5765 true Chr18: 48813691-48819455 Glycine max
Glyma.18G204800 0.5kb upstream 0.5kb upstream 500 false Chr18: 48818956-48819455 Glycine max
Glyma.18G204800 0.5kb downstream 0.5kb downstream 5765 true Chr18: 48813191-48818955 Glycine max
Glyma.18G204800 0.5kb downstream 0.5kb downstream 500 false Chr18: 48813191-48813690 Glycine max
Glyma.18G204800 1.0kb upstream 1.0kb upstream 6265 true Chr18: 48813691-48819955 Glycine max
Glyma.18G204800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 48818956-48819955 Glycine max
Glyma.18G204800 1.0kb downstream 1.0kb downstream 6265 true Chr18: 48812691-48818955 Glycine max
Glyma.18G204800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 48812691-48813690 Glycine max
Glyma.18G204800 2.0kb upstream 2.0kb upstream 7265 true Chr18: 48813691-48820955 Glycine max
Glyma.18G204800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 48818956-48820955 Glycine max
Glyma.18G204800 2.0kb downstream 2.0kb downstream 7265 true Chr18: 48811691-48818955 Glycine max
Glyma.18G204800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 48811691-48813690 Glycine max
Glyma.18G204800 5.0kb upstream 5.0kb upstream 10265 true Chr18: 48813691-48823955 Glycine max
Glyma.18G204800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 48818956-48823955 Glycine max
Glyma.18G204800 5.0kb downstream 5.0kb downstream 10265 true Chr18: 48808691-48818955 Glycine max
Glyma.18G204800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 48808691-48813690 Glycine max
Glyma.18G204800 10.0kb upstream 10.0kb upstream 15265 true Chr18: 48813691-48828955 Glycine max
Glyma.18G204800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 48818956-48828955 Glycine max
Glyma.18G204800 10.0kb downstream 10.0kb downstream 15265 true Chr18: 48803691-48818955 Glycine max
Glyma.18G204800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 48803691-48813690 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310224 5265 Fabidae View MSA
124072416 5270 Rosid View MSA
123737751 5271 Pentapetalae View MSA
122794569 5272 Eudicot View MSA
122050479 5273 Angiosperm View MSA
121349558 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0293 0.0 52.9848    
cufflinks 1.49557 0.0 8.39328    
cufflinks 15.2532 0.0 58.6399   High
cufflinks 0.816598 0.0 3.55342    
cufflinks 5.71695 0.0 18.5368    
cufflinks 16.9481 0.0 50.7734   High
cufflinks 0.230785 0.0 1.13755   Low
cufflinks 2.43088 0.0 7.62047    
cufflinks 5.02598 0.0 16.6788    
cufflinks 1.845        
cufflinks 4.779        
cufflinks 4.44        
cufflinks 0.692       Low
cufflinks 0.167       Low
cufflinks 0.68       Low
cufflinks 3.294        
cufflinks 44.73     High High
cufflinks 4.344        
cufflinks 0.454       Low
cufflinks 4.492        
cufflinks 4.411        
cufflinks 4.731        
cufflinks 2.558        
cufflinks 8.325     High  
cufflinks 3.681        
cufflinks 13.658     High High

0 Strain