Gene : Glyma.01G215100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR18896//PTHR18896:SF15 - PHOSPHOLIPASE D Genomic Order:  2151
Name:  ? Glyma.01G215100 Secondary Identifier:  ? PAC:30541933
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY-7039 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G215100 0.5kb upstream 0.5kb upstream 6352 true Chr01: 54579428-54585779 Glycine max
Glyma.01G215100 0.5kb upstream 0.5kb upstream 500 false Chr01: 54579428-54579927 Glycine max
Glyma.01G215100 0.5kb downstream 0.5kb downstream 6352 true Chr01: 54579928-54586279 Glycine max
Glyma.01G215100 0.5kb downstream 0.5kb downstream 500 false Chr01: 54585780-54586279 Glycine max
Glyma.01G215100 1.0kb upstream 1.0kb upstream 6852 true Chr01: 54578928-54585779 Glycine max
Glyma.01G215100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54578928-54579927 Glycine max
Glyma.01G215100 1.0kb downstream 1.0kb downstream 6852 true Chr01: 54579928-54586779 Glycine max
Glyma.01G215100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54585780-54586779 Glycine max
Glyma.01G215100 2.0kb upstream 2.0kb upstream 7852 true Chr01: 54577928-54585779 Glycine max
Glyma.01G215100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54577928-54579927 Glycine max
Glyma.01G215100 2.0kb downstream 2.0kb downstream 7852 true Chr01: 54579928-54587779 Glycine max
Glyma.01G215100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54585780-54587779 Glycine max
Glyma.01G215100 5.0kb upstream 5.0kb upstream 10852 true Chr01: 54574928-54585779 Glycine max
Glyma.01G215100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54574928-54579927 Glycine max
Glyma.01G215100 5.0kb downstream 5.0kb downstream 10852 true Chr01: 54579928-54590779 Glycine max
Glyma.01G215100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54585780-54590779 Glycine max
Glyma.01G215100 10.0kb upstream 10.0kb upstream 15852 true Chr01: 54569928-54585779 Glycine max
Glyma.01G215100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54569928-54579927 Glycine max
Glyma.01G215100 10.0kb downstream 10.0kb downstream 15852 true Chr01: 54579928-54595779 Glycine max
Glyma.01G215100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54585780-54595779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310635 5265 Fabidae View MSA
124072300 5270 Rosid View MSA
123749008 5271 Pentapetalae View MSA
122790888 5272 Eudicot View MSA
122043294 5273 Angiosperm View MSA
121349961 5274 Embryophyte View MSA
123381517 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.0854 0.0 129.264 High High
cufflinks 2.4618 0.0 9.04168    
cufflinks 3.71777 0.0 12.1319    
cufflinks 0.764329 0.0 3.03685   Low
cufflinks 2.98085 0.0 10.3998    
cufflinks 12.6222 0.0 44.7303    
cufflinks 0.454471 0.0 2.72635   Low
cufflinks 2.27144 0.0 8.50918    
cufflinks 6.28936 0.0 19.2263    
cufflinks 0.878       Low
cufflinks 15.152     High High
cufflinks 1.226       Low
cufflinks 3.863        
cufflinks 1.151       Low
cufflinks 2.172        
cufflinks 6.257        
cufflinks 25.709     High High
cufflinks 0.759       Low
cufflinks 1.472        
cufflinks 3.802        
cufflinks 17.097     High High
cufflinks 5.437        
cufflinks 3.191        
cufflinks 26.507     High High
cufflinks 3.425        
cufflinks 16.127     High High

0 Strain