Gene : Glyma.01G224300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11246//PTHR11246:SF14 - PRE-MRNA SPLICING FACTOR Genomic Order:  2243
Name:  ? Glyma.01G224300 Secondary Identifier:  ? PAC:30542439
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G224300 0.5kb upstream 0.5kb upstream 5507 true Chr01: 55323414-55328920 Glycine max
Glyma.01G224300 0.5kb upstream 0.5kb upstream 500 false Chr01: 55323414-55323913 Glycine max
Glyma.01G224300 0.5kb downstream 0.5kb downstream 5507 true Chr01: 55323914-55329420 Glycine max
Glyma.01G224300 0.5kb downstream 0.5kb downstream 500 false Chr01: 55328921-55329420 Glycine max
Glyma.01G224300 1.0kb upstream 1.0kb upstream 6007 true Chr01: 55322914-55328920 Glycine max
Glyma.01G224300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55322914-55323913 Glycine max
Glyma.01G224300 1.0kb downstream 1.0kb downstream 6007 true Chr01: 55323914-55329920 Glycine max
Glyma.01G224300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55328921-55329920 Glycine max
Glyma.01G224300 2.0kb upstream 2.0kb upstream 7007 true Chr01: 55321914-55328920 Glycine max
Glyma.01G224300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55321914-55323913 Glycine max
Glyma.01G224300 2.0kb downstream 2.0kb downstream 7007 true Chr01: 55323914-55330920 Glycine max
Glyma.01G224300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55328921-55330920 Glycine max
Glyma.01G224300 5.0kb upstream 5.0kb upstream 10007 true Chr01: 55318914-55328920 Glycine max
Glyma.01G224300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55318914-55323913 Glycine max
Glyma.01G224300 5.0kb downstream 5.0kb downstream 10007 true Chr01: 55323914-55333920 Glycine max
Glyma.01G224300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55328921-55333920 Glycine max
Glyma.01G224300 10.0kb upstream 10.0kb upstream 15007 true Chr01: 55313914-55328920 Glycine max
Glyma.01G224300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55313914-55323913 Glycine max
Glyma.01G224300 10.0kb downstream 10.0kb downstream 15007 true Chr01: 55323914-55338920 Glycine max
Glyma.01G224300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55328921-55338920 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306800 5265 Fabidae View MSA
124066520 5270 Rosid View MSA
123747782 5271 Pentapetalae View MSA
122796524 5272 Eudicot View MSA
122043261 5273 Angiosperm View MSA
121344122 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5499 0.0 51.0648    
cufflinks 13.8121 0.0 48.0896    
cufflinks 9.20426 0.0 27.2497   Low
cufflinks 16.4241 0.0 58.4339    
cufflinks 14.1317 0.0 49.2939    
cufflinks 9.61566 0.0 32.9189   Low
cufflinks 13.8956 0.0 48.2134    
cufflinks 17.5604 0.0 62.6656   High
cufflinks 12.4784 0.0 37.3702    
cufflinks 4.711        
cufflinks 2.205       Low
cufflinks 3.986        
cufflinks 4.552        
cufflinks 5.385       High
cufflinks 2.857       Low
cufflinks 4.74        
cufflinks 2.189       Low
cufflinks 4.075        
cufflinks 4.8        
cufflinks 5.153        
cufflinks 3.488        
cufflinks 5.168        
cufflinks 4.731        
cufflinks 3.207        
cufflinks 5.576       High
cufflinks 3.463        

0 Strain