Gene : Glyma.01G212900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  2129
Name:  ? Glyma.01G212900 Secondary Identifier:  ? PAC:30544767
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G212900 0.5kb upstream 0.5kb upstream 4228 true Chr01: 54422490-54426717 Glycine max
Glyma.01G212900 0.5kb upstream 0.5kb upstream 500 false Chr01: 54422490-54422989 Glycine max
Glyma.01G212900 0.5kb downstream 0.5kb downstream 4228 true Chr01: 54422990-54427217 Glycine max
Glyma.01G212900 0.5kb downstream 0.5kb downstream 500 false Chr01: 54426718-54427217 Glycine max
Glyma.01G212900 1.0kb upstream 1.0kb upstream 4728 true Chr01: 54421990-54426717 Glycine max
Glyma.01G212900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54421990-54422989 Glycine max
Glyma.01G212900 1.0kb downstream 1.0kb downstream 4728 true Chr01: 54422990-54427717 Glycine max
Glyma.01G212900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54426718-54427717 Glycine max
Glyma.01G212900 2.0kb upstream 2.0kb upstream 5728 true Chr01: 54420990-54426717 Glycine max
Glyma.01G212900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54420990-54422989 Glycine max
Glyma.01G212900 2.0kb downstream 2.0kb downstream 5728 true Chr01: 54422990-54428717 Glycine max
Glyma.01G212900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54426718-54428717 Glycine max
Glyma.01G212900 5.0kb upstream 5.0kb upstream 8728 true Chr01: 54417990-54426717 Glycine max
Glyma.01G212900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54417990-54422989 Glycine max
Glyma.01G212900 5.0kb downstream 5.0kb downstream 8728 true Chr01: 54422990-54431717 Glycine max
Glyma.01G212900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54426718-54431717 Glycine max
Glyma.01G212900 10.0kb upstream 10.0kb upstream 13728 true Chr01: 54412990-54426717 Glycine max
Glyma.01G212900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54412990-54422989 Glycine max
Glyma.01G212900 10.0kb downstream 10.0kb downstream 13728 true Chr01: 54422990-54436717 Glycine max
Glyma.01G212900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54426718-54436717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313551 5265 Fabidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.4918 0.0 5.39075   Low
cufflinks 2.13067 0.0 7.49869    
cufflinks 3.43698 0.0 11.5227   High
cufflinks 2.64238 0.0 9.12141    
cufflinks 1.4246 0.0 5.15611   Low
cufflinks 1.84481 0.0 6.55557    
cufflinks 3.07943 0.0 10.4706    
cufflinks 3.17853 0.0 10.7523   High
cufflinks 1.76868 0.0 6.30645    
cufflinks 0.478        
cufflinks 0.23        
cufflinks 0.849       High
cufflinks 0.381        
cufflinks 0.527        
cufflinks 0.188       Low
cufflinks 0.308        
cufflinks 0.748       High
cufflinks 0.672       High
cufflinks 0.791       High
cufflinks 0.273        
cufflinks 0.179       Low
cufflinks 0.381        
cufflinks 0.685       High
cufflinks 0.389        
cufflinks 0.247        
cufflinks 0.193       Low

0 Strain