Gene : Glyma.01G226700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10338:SF126 - MAGNESIUM-CHELATASE SUBUNIT CHLD, CHLOROPLASTIC Genomic Order:  2267
Name:  ? Glyma.01G226700 Secondary Identifier:  ? PAC:30543854
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CHLOROPHYLL-SYN Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G226700 0.5kb upstream 0.5kb upstream 10184 true Chr01: 55505050-55515233 Glycine max
Glyma.01G226700 0.5kb upstream 0.5kb upstream 500 false Chr01: 55505050-55505549 Glycine max
Glyma.01G226700 0.5kb downstream 0.5kb downstream 10184 true Chr01: 55505550-55515733 Glycine max
Glyma.01G226700 0.5kb downstream 0.5kb downstream 500 false Chr01: 55515234-55515733 Glycine max
Glyma.01G226700 1.0kb upstream 1.0kb upstream 10684 true Chr01: 55504550-55515233 Glycine max
Glyma.01G226700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55504550-55505549 Glycine max
Glyma.01G226700 1.0kb downstream 1.0kb downstream 10684 true Chr01: 55505550-55516233 Glycine max
Glyma.01G226700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55515234-55516233 Glycine max
Glyma.01G226700 2.0kb upstream 2.0kb upstream 11684 true Chr01: 55503550-55515233 Glycine max
Glyma.01G226700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55503550-55505549 Glycine max
Glyma.01G226700 2.0kb downstream 2.0kb downstream 11684 true Chr01: 55505550-55517233 Glycine max
Glyma.01G226700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55515234-55517233 Glycine max
Glyma.01G226700 5.0kb upstream 5.0kb upstream 14684 true Chr01: 55500550-55515233 Glycine max
Glyma.01G226700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55500550-55505549 Glycine max
Glyma.01G226700 5.0kb downstream 5.0kb downstream 14684 true Chr01: 55505550-55520233 Glycine max
Glyma.01G226700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55515234-55520233 Glycine max
Glyma.01G226700 10.0kb upstream 10.0kb upstream 19684 true Chr01: 55495550-55515233 Glycine max
Glyma.01G226700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55495550-55505549 Glycine max
Glyma.01G226700 10.0kb downstream 10.0kb downstream 19684 true Chr01: 55505550-55525233 Glycine max
Glyma.01G226700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55515234-55525233 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026552 5273 Angiosperm View MSA
122304637 5265 Fabidae View MSA
124050211 5270 Rosid View MSA
123740767 5271 Pentapetalae View MSA
122793676 5272 Eudicot View MSA
121344824 5274 Embryophyte View MSA
123424530 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4758 0.0 55.7123   High
cufflinks 14.7307 0.0 53.3839   High
cufflinks 3.64559 0.0 14.8724    
cufflinks 7.46145 0.0 22.7244    
cufflinks 6.02627 0.0 18.7023    
cufflinks 2.83387 0.0 10.9057   Low
cufflinks 7.81965 0.0 28.5703    
cufflinks 5.1511 0.0 16.3224    
cufflinks 2.16418 0.0 9.17769   Low
cufflinks 1.46        
cufflinks 0.118       Low
cufflinks 0.967        
cufflinks 0.323        
cufflinks 0.365        
cufflinks 0.397        
cufflinks 5.969       High
cufflinks 0.131       Low
cufflinks 1.189        
cufflinks 2.632        
cufflinks 6.456       High
cufflinks 0.191        
cufflinks 5.8       High
cufflinks 4.449       High
cufflinks 0.114       Low
cufflinks 6.134       High
cufflinks 0.211        

0 Strain