Gene : Glyma.01G225700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13513 - E3 UBIQUITIN-PROTEIN LIGASE UBR7 Genomic Order:  2257
Name:  ? Glyma.01G225700 Secondary Identifier:  ? PAC:30542518
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G225700 0.5kb upstream 0.5kb upstream 5011 true Chr01: 55434401-55439411 Glycine max
Glyma.01G225700 0.5kb upstream 0.5kb upstream 500 false Chr01: 55438912-55439411 Glycine max
Glyma.01G225700 0.5kb downstream 0.5kb downstream 5011 true Chr01: 55433901-55438911 Glycine max
Glyma.01G225700 0.5kb downstream 0.5kb downstream 500 false Chr01: 55433901-55434400 Glycine max
Glyma.01G225700 1.0kb upstream 1.0kb upstream 5511 true Chr01: 55434401-55439911 Glycine max
Glyma.01G225700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55438912-55439911 Glycine max
Glyma.01G225700 1.0kb downstream 1.0kb downstream 5511 true Chr01: 55433401-55438911 Glycine max
Glyma.01G225700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55433401-55434400 Glycine max
Glyma.01G225700 2.0kb upstream 2.0kb upstream 6511 true Chr01: 55434401-55440911 Glycine max
Glyma.01G225700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55438912-55440911 Glycine max
Glyma.01G225700 2.0kb downstream 2.0kb downstream 6511 true Chr01: 55432401-55438911 Glycine max
Glyma.01G225700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55432401-55434400 Glycine max
Glyma.01G225700 5.0kb upstream 5.0kb upstream 9511 true Chr01: 55434401-55443911 Glycine max
Glyma.01G225700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55438912-55443911 Glycine max
Glyma.01G225700 5.0kb downstream 5.0kb downstream 9511 true Chr01: 55429401-55438911 Glycine max
Glyma.01G225700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55429401-55434400 Glycine max
Glyma.01G225700 10.0kb upstream 10.0kb upstream 14511 true Chr01: 55434401-55448911 Glycine max
Glyma.01G225700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55438912-55448911 Glycine max
Glyma.01G225700 10.0kb downstream 10.0kb downstream 14511 true Chr01: 55424401-55438911 Glycine max
Glyma.01G225700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55424401-55434400 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301887 5265 Fabidae View MSA
124062977 5270 Rosid View MSA
123737200 5271 Pentapetalae View MSA
122790604 5272 Eudicot View MSA
122043185 5273 Angiosperm View MSA
121344097 5274 Embryophyte View MSA
123379975 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9235 0.0 45.8812   Low
cufflinks 24.0355 0.0 91.7088 High High
cufflinks 16.1721 0.0 60.9965    
cufflinks 13.6382 0.0 51.6877    
cufflinks 12.7264 0.0 48.5981    
cufflinks 11.8406 0.0 46.6767   Low
cufflinks 15.8545 0.0 59.7237    
cufflinks 17.1916 0.0 66.6294    
cufflinks 13.9977 0.0 53.06    
cufflinks 1.595        
cufflinks 1.032       Low
cufflinks 1.976        
cufflinks 1.613        
cufflinks 1.604        
cufflinks 1.29        
cufflinks 1.46        
cufflinks 1.481        
cufflinks 1.771        
cufflinks 3.155       High
cufflinks 1.167       Low
cufflinks 1.292        
cufflinks 1.46        
cufflinks 2.011       High
cufflinks 1.39        
cufflinks 1.287        
cufflinks 1.71        

0 Strain