Gene : Glyma.01G214300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  2143
Name:  ? Glyma.01G214300 Secondary Identifier:  ? PAC:30544607
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G214300 0.5kb upstream 0.5kb upstream 4734 true Chr01: 54533991-54538724 Glycine max
Glyma.01G214300 0.5kb upstream 0.5kb upstream 500 false Chr01: 54533991-54534490 Glycine max
Glyma.01G214300 0.5kb downstream 0.5kb downstream 4734 true Chr01: 54534491-54539224 Glycine max
Glyma.01G214300 0.5kb downstream 0.5kb downstream 500 false Chr01: 54538725-54539224 Glycine max
Glyma.01G214300 1.0kb upstream 1.0kb upstream 5234 true Chr01: 54533491-54538724 Glycine max
Glyma.01G214300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54533491-54534490 Glycine max
Glyma.01G214300 1.0kb downstream 1.0kb downstream 5234 true Chr01: 54534491-54539724 Glycine max
Glyma.01G214300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54538725-54539724 Glycine max
Glyma.01G214300 2.0kb upstream 2.0kb upstream 6234 true Chr01: 54532491-54538724 Glycine max
Glyma.01G214300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54532491-54534490 Glycine max
Glyma.01G214300 2.0kb downstream 2.0kb downstream 6234 true Chr01: 54534491-54540724 Glycine max
Glyma.01G214300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54538725-54540724 Glycine max
Glyma.01G214300 5.0kb upstream 5.0kb upstream 9234 true Chr01: 54529491-54538724 Glycine max
Glyma.01G214300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54529491-54534490 Glycine max
Glyma.01G214300 5.0kb downstream 5.0kb downstream 9234 true Chr01: 54534491-54543724 Glycine max
Glyma.01G214300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54538725-54543724 Glycine max
Glyma.01G214300 10.0kb upstream 10.0kb upstream 14234 true Chr01: 54524491-54538724 Glycine max
Glyma.01G214300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54524491-54534490 Glycine max
Glyma.01G214300 10.0kb downstream 10.0kb downstream 14234 true Chr01: 54534491-54548724 Glycine max
Glyma.01G214300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54538725-54548724 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312093 5265 Fabidae View MSA
124060834 5270 Rosid View MSA
123741079 5271 Pentapetalae View MSA
122790680 5272 Eudicot View MSA
122043689 5273 Angiosperm View MSA
121345999 5274 Embryophyte View MSA
123428179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.1771 0.0 307.449 High High
cufflinks 2.10789 0.0 7.90602    
cufflinks 2.52009 0.0 12.3931    
cufflinks 4.31056 0.0 18.2312    
cufflinks 0.215885 0.0 0.838934 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.1586 0.0 50.2073    
cufflinks 1.60063 0.0 6.4728    
cufflinks 0.186071 0.0 0.727734 Low Low
cufflinks 0.125        
cufflinks 0.004     Low Low
cufflinks 1.507        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 8.724     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.173        
cufflinks 0.202        
cufflinks 5.997        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.191        
cufflinks 5.794        
cufflinks 0.002     Low Low
cufflinks 8.271     High  
cufflinks 0.049     Low  

0 Strain