Gene : Glyma.18G240400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10293:SF37 - MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC Genomic Order:  2404
Name:  ? Glyma.18G240400 Secondary Identifier:  ? PAC:30555315
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G240400 0.5kb upstream 0.5kb upstream 3386 true Chr18: 52914082-52917467 Glycine max
Glyma.18G240400 0.5kb upstream 0.5kb upstream 500 false Chr18: 52916968-52917467 Glycine max
Glyma.18G240400 0.5kb downstream 0.5kb downstream 3386 true Chr18: 52913582-52916967 Glycine max
Glyma.18G240400 0.5kb downstream 0.5kb downstream 500 false Chr18: 52913582-52914081 Glycine max
Glyma.18G240400 1.0kb upstream 1.0kb upstream 3886 true Chr18: 52914082-52917967 Glycine max
Glyma.18G240400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 52916968-52917967 Glycine max
Glyma.18G240400 1.0kb downstream 1.0kb downstream 3886 true Chr18: 52913082-52916967 Glycine max
Glyma.18G240400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 52913082-52914081 Glycine max
Glyma.18G240400 2.0kb upstream 2.0kb upstream 4886 true Chr18: 52914082-52918967 Glycine max
Glyma.18G240400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52916968-52918967 Glycine max
Glyma.18G240400 2.0kb downstream 2.0kb downstream 4886 true Chr18: 52912082-52916967 Glycine max
Glyma.18G240400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 52912082-52914081 Glycine max
Glyma.18G240400 5.0kb upstream 5.0kb upstream 7886 true Chr18: 52914082-52921967 Glycine max
Glyma.18G240400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52916968-52921967 Glycine max
Glyma.18G240400 5.0kb downstream 5.0kb downstream 7886 true Chr18: 52909082-52916967 Glycine max
Glyma.18G240400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 52909082-52914081 Glycine max
Glyma.18G240400 10.0kb upstream 10.0kb upstream 12886 true Chr18: 52914082-52926967 Glycine max
Glyma.18G240400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52916968-52926967 Glycine max
Glyma.18G240400 10.0kb downstream 10.0kb downstream 12886 true Chr18: 52904082-52916967 Glycine max
Glyma.18G240400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 52904082-52914081 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310199 5265 Fabidae View MSA
124074597 5270 Rosid View MSA
123743063 5271 Pentapetalae View MSA
122787324 5272 Eudicot View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.9463 0.0 178.151 High High
cufflinks 37.0644 0.0 125.265 High  
cufflinks 19.3496 0.0 68.3577    
cufflinks 25.1787 0.0 86.8826 High  
cufflinks 20.0063 0.0 70.6135 High  
cufflinks 25.0085 0.0 85.8885 High  
cufflinks 65.5508 0.0 232.351 High High
cufflinks 28.3882 0.0 97.5252 High  
cufflinks 21.009 0.0 73.7478 High  
cufflinks 4.731        
cufflinks 0.471       Low
cufflinks 4.358        
cufflinks 2.616        
cufflinks 2.793        
cufflinks 1.007        
cufflinks 6.149        
cufflinks 1.154        
cufflinks 5.094        
cufflinks 5.318        
cufflinks 5.743        
cufflinks 0.551       Low
cufflinks 6.244        
cufflinks 7.888     High High
cufflinks 0.704       Low
cufflinks 6.473        
cufflinks 0.859       Low

0 Strain