Gene : Glyma.01G244300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11079:SF58 - RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL Genomic Order:  2443
Name:  ? Glyma.01G244300 Secondary Identifier:  ? PAC:30544558
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G244300 0.5kb upstream 0.5kb upstream 3827 true Chr01: 56669222-56673048 Glycine max
Glyma.01G244300 0.5kb upstream 0.5kb upstream 500 false Chr01: 56669222-56669721 Glycine max
Glyma.01G244300 0.5kb downstream 0.5kb downstream 3827 true Chr01: 56669722-56673548 Glycine max
Glyma.01G244300 0.5kb downstream 0.5kb downstream 500 false Chr01: 56673049-56673548 Glycine max
Glyma.01G244300 1.0kb upstream 1.0kb upstream 4327 true Chr01: 56668722-56673048 Glycine max
Glyma.01G244300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56668722-56669721 Glycine max
Glyma.01G244300 1.0kb downstream 1.0kb downstream 4327 true Chr01: 56669722-56674048 Glycine max
Glyma.01G244300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56673049-56674048 Glycine max
Glyma.01G244300 2.0kb upstream 2.0kb upstream 5327 true Chr01: 56667722-56673048 Glycine max
Glyma.01G244300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56667722-56669721 Glycine max
Glyma.01G244300 2.0kb downstream 2.0kb downstream 5327 true Chr01: 56669722-56675048 Glycine max
Glyma.01G244300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56673049-56675048 Glycine max
Glyma.01G244300 5.0kb upstream 5.0kb upstream 8327 true Chr01: 56664722-56673048 Glycine max
Glyma.01G244300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56664722-56669721 Glycine max
Glyma.01G244300 5.0kb downstream 5.0kb downstream 8327 true Chr01: 56669722-56678048 Glycine max
Glyma.01G244300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56673049-56678048 Glycine max
Glyma.01G244300 10.0kb upstream 10.0kb upstream 13327 true Chr01: 56659722-56673048 Glycine max
Glyma.01G244300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56659722-56669721 Glycine max
Glyma.01G244300 10.0kb downstream 10.0kb downstream 13327 true Chr01: 56669722-56683048 Glycine max
Glyma.01G244300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56673049-56683048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307711 5265 Fabidae View MSA
124062896 5270 Rosid View MSA
123739402 5271 Pentapetalae View MSA
122789155 5272 Eudicot View MSA
122044884 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.47561 0.0 16.8202   High
cufflinks 2.74883 0.0 17.7272    
cufflinks 1.96 0.0 11.6305    
cufflinks 1.50642 0.0 7.95577    
cufflinks 2.32471 0.0 10.9302    
cufflinks 1.36323 0.0 7.48396   Low
cufflinks 2.47547 0.0 11.4362    
cufflinks 1.56517 0.0 10.0617    
cufflinks 1.27528 0.0 8.65113   Low
cufflinks 0.218        
cufflinks 0.172       Low
cufflinks 0.284        
cufflinks 0.273        
cufflinks 0.426        
cufflinks 0.284        
cufflinks 0.666       High
cufflinks 0.106       Low
cufflinks 0.312        
cufflinks 0.526        
cufflinks 0.711       High
cufflinks 0.248        
cufflinks 0.685       High
cufflinks 0.668       High
cufflinks 0.22        
cufflinks 0.635       High
cufflinks 0.17       Low

0 Strain