Gene : Glyma.01G001500 G. max Wm82.a2.v1
Defline:  (1 of 3) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  15
Name:  ? Glyma.01G001500 Secondary Identifier:  ? PAC:30545019
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G001500 0.5kb upstream 0.5kb upstream 14263 true Chr01: 246404-260666 Glycine max
Glyma.01G001500 0.5kb upstream 0.5kb upstream 500 false Chr01: 246404-246903 Glycine max
Glyma.01G001500 0.5kb downstream 0.5kb downstream 14263 true Chr01: 246904-261166 Glycine max
Glyma.01G001500 0.5kb downstream 0.5kb downstream 500 false Chr01: 260667-261166 Glycine max
Glyma.01G001500 1.0kb upstream 1.0kb upstream 14763 true Chr01: 245904-260666 Glycine max
Glyma.01G001500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 245904-246903 Glycine max
Glyma.01G001500 1.0kb downstream 1.0kb downstream 14763 true Chr01: 246904-261666 Glycine max
Glyma.01G001500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 260667-261666 Glycine max
Glyma.01G001500 2.0kb upstream 2.0kb upstream 15763 true Chr01: 244904-260666 Glycine max
Glyma.01G001500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 244904-246903 Glycine max
Glyma.01G001500 2.0kb downstream 2.0kb downstream 15763 true Chr01: 246904-262666 Glycine max
Glyma.01G001500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 260667-262666 Glycine max
Glyma.01G001500 5.0kb upstream 5.0kb upstream 18763 true Chr01: 241904-260666 Glycine max
Glyma.01G001500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 241904-246903 Glycine max
Glyma.01G001500 5.0kb downstream 5.0kb downstream 18763 true Chr01: 246904-265666 Glycine max
Glyma.01G001500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 260667-265666 Glycine max
Glyma.01G001500 10.0kb upstream 10.0kb upstream 23763 true Chr01: 236904-260666 Glycine max
Glyma.01G001500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 236904-246903 Glycine max
Glyma.01G001500 10.0kb downstream 10.0kb downstream 23763 true Chr01: 246904-270666 Glycine max
Glyma.01G001500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 260667-270666 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314535 5265 Fabidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00764722 0.0 0.398191 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.538586 0.0 3.88046    
cufflinks 0.438764 0.0 3.02346    
cufflinks 0.0207791 0.0 0.578167 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.10461 0.0 11.6596   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.281        
cufflinks 0.001     Low Low
cufflinks 0.125        
cufflinks 0.075        
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.261       High
cufflinks 0.002     Low Low
cufflinks 0.009     Low  
cufflinks 0.001     Low Low
cufflinks 0.565        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.262        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.589        

0 Strain