Gene : Glyma.01G001600 G. max Wm82.a2.v1
Defline:  (1 of 2) PF04192 - Utp21 specific WD40 associated putative domain (Utp21) Genomic Order:  16
Name:  ? Glyma.01G001600 Secondary Identifier:  ? PAC:30543670
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G001600 0.5kb upstream 0.5kb upstream 9628 true Chr01: 260356-269983 Glycine max
Glyma.01G001600 0.5kb upstream 0.5kb upstream 500 false Chr01: 269484-269983 Glycine max
Glyma.01G001600 0.5kb downstream 0.5kb downstream 9628 true Chr01: 259856-269483 Glycine max
Glyma.01G001600 0.5kb downstream 0.5kb downstream 500 false Chr01: 259856-260355 Glycine max
Glyma.01G001600 1.0kb upstream 1.0kb upstream 10128 true Chr01: 260356-270483 Glycine max
Glyma.01G001600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 269484-270483 Glycine max
Glyma.01G001600 1.0kb downstream 1.0kb downstream 10128 true Chr01: 259356-269483 Glycine max
Glyma.01G001600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 259356-260355 Glycine max
Glyma.01G001600 2.0kb upstream 2.0kb upstream 11128 true Chr01: 260356-271483 Glycine max
Glyma.01G001600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 269484-271483 Glycine max
Glyma.01G001600 2.0kb downstream 2.0kb downstream 11128 true Chr01: 258356-269483 Glycine max
Glyma.01G001600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 258356-260355 Glycine max
Glyma.01G001600 5.0kb upstream 5.0kb upstream 14128 true Chr01: 260356-274483 Glycine max
Glyma.01G001600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 269484-274483 Glycine max
Glyma.01G001600 5.0kb downstream 5.0kb downstream 14128 true Chr01: 255356-269483 Glycine max
Glyma.01G001600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 255356-260355 Glycine max
Glyma.01G001600 10.0kb upstream 10.0kb upstream 19128 true Chr01: 260356-279483 Glycine max
Glyma.01G001600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 269484-279483 Glycine max
Glyma.01G001600 10.0kb downstream 10.0kb downstream 19128 true Chr01: 250356-269483 Glycine max
Glyma.01G001600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 250356-260355 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306953 5265 Fabidae View MSA
124065336 5270 Rosid View MSA
123738219 5271 Pentapetalae View MSA
122786158 5272 Eudicot View MSA
122041805 5273 Angiosperm View MSA
121346831 5274 Embryophyte View MSA
123424252 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.24639 0.0 23.9709   High
cufflinks 2.91241 0.0 14.6394    
cufflinks 2.38321 0.0 11.6918    
cufflinks 1.97204 0.0 10.8558    
cufflinks 4.19389 0.0 12.6896   High
cufflinks 2.0743 0.0 11.077    
cufflinks 2.19243 0.0 11.1732    
cufflinks 2.35362 0.0 11.8334    
cufflinks 2.77894 0.0 16.6763    
cufflinks 0.414        
cufflinks 0.212       Low
cufflinks 0.65        
cufflinks 1.202       High
cufflinks 1.498       High
cufflinks 0.233       Low
cufflinks 0.742        
cufflinks 0.344        
cufflinks 0.572        
cufflinks 0.762        
cufflinks 0.679        
cufflinks 0.249       Low
cufflinks 0.787        
cufflinks 0.947        
cufflinks 0.267       Low
cufflinks 0.709        
cufflinks 0.47        

0 Strain