Gene : Glyma.01G001300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11764:SF15 - CYCLOARTENOL SYNTHASE Genomic Order:  13
Name:  ? Glyma.01G001300 Secondary Identifier:  ? PAC:30544327
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G001300 0.5kb upstream 0.5kb upstream 11467 true Chr01: 227021-238487 Glycine max
Glyma.01G001300 0.5kb upstream 0.5kb upstream 500 false Chr01: 237988-238487 Glycine max
Glyma.01G001300 0.5kb downstream 0.5kb downstream 11467 true Chr01: 226521-237987 Glycine max
Glyma.01G001300 0.5kb downstream 0.5kb downstream 500 false Chr01: 226521-227020 Glycine max
Glyma.01G001300 1.0kb upstream 1.0kb upstream 11967 true Chr01: 227021-238987 Glycine max
Glyma.01G001300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 237988-238987 Glycine max
Glyma.01G001300 1.0kb downstream 1.0kb downstream 11967 true Chr01: 226021-237987 Glycine max
Glyma.01G001300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 226021-227020 Glycine max
Glyma.01G001300 2.0kb upstream 2.0kb upstream 12967 true Chr01: 227021-239987 Glycine max
Glyma.01G001300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 237988-239987 Glycine max
Glyma.01G001300 2.0kb downstream 2.0kb downstream 12967 true Chr01: 225021-237987 Glycine max
Glyma.01G001300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 225021-227020 Glycine max
Glyma.01G001300 5.0kb upstream 5.0kb upstream 15967 true Chr01: 227021-242987 Glycine max
Glyma.01G001300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 237988-242987 Glycine max
Glyma.01G001300 5.0kb downstream 5.0kb downstream 15967 true Chr01: 222021-237987 Glycine max
Glyma.01G001300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 222021-227020 Glycine max
Glyma.01G001300 10.0kb upstream 10.0kb upstream 20967 true Chr01: 227021-247987 Glycine max
Glyma.01G001300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 237988-247987 Glycine max
Glyma.01G001300 10.0kb downstream 10.0kb downstream 20967 true Chr01: 217021-237987 Glycine max
Glyma.01G001300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 217021-227020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305993 5265 Fabidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.8414 0.0 116.284 High  
cufflinks 25.4796 0.0 96.0676 High  
cufflinks 18.5665 0.0 66.031   Low
cufflinks 45.0387 0.0 198.482 High High
cufflinks 30.1964 0.0 118.074 High  
cufflinks 22.5756 0.0 82.4501    
cufflinks 36.4118 0.0 149.084 High  
cufflinks 35.1413 0.0 142.545 High  
cufflinks 20.4765 0.0 74.0928 High Low
cufflinks 5.006        
cufflinks 0.85       Low
cufflinks 3.077        
cufflinks 4.518        
cufflinks 5.072        
cufflinks 1.215       Low
cufflinks 4.167        
cufflinks 1.561       Low
cufflinks 5.069        
cufflinks 4.74        
cufflinks 3.588        
cufflinks 1.972        
cufflinks 3.914        
cufflinks 3.817        
cufflinks 1.303       Low
cufflinks 3.715        
cufflinks 1.715        

0 Strain