Gene : Glyma.18G241400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12608:SF4 - GDT1-LIKE PROTEIN 3 Genomic Order:  2414
Name:  ? Glyma.18G241400 Secondary Identifier:  ? PAC:30556044
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G241400 0.5kb upstream 0.5kb upstream 8441 true Chr18: 53000830-53009270 Glycine max
Glyma.18G241400 0.5kb upstream 0.5kb upstream 500 false Chr18: 53000830-53001329 Glycine max
Glyma.18G241400 0.5kb downstream 0.5kb downstream 8441 true Chr18: 53001330-53009770 Glycine max
Glyma.18G241400 0.5kb downstream 0.5kb downstream 500 false Chr18: 53009271-53009770 Glycine max
Glyma.18G241400 1.0kb upstream 1.0kb upstream 8941 true Chr18: 53000330-53009270 Glycine max
Glyma.18G241400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53000330-53001329 Glycine max
Glyma.18G241400 1.0kb downstream 1.0kb downstream 8941 true Chr18: 53001330-53010270 Glycine max
Glyma.18G241400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53009271-53010270 Glycine max
Glyma.18G241400 2.0kb upstream 2.0kb upstream 9941 true Chr18: 52999330-53009270 Glycine max
Glyma.18G241400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52999330-53001329 Glycine max
Glyma.18G241400 2.0kb downstream 2.0kb downstream 9941 true Chr18: 53001330-53011270 Glycine max
Glyma.18G241400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53009271-53011270 Glycine max
Glyma.18G241400 5.0kb upstream 5.0kb upstream 12941 true Chr18: 52996330-53009270 Glycine max
Glyma.18G241400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52996330-53001329 Glycine max
Glyma.18G241400 5.0kb downstream 5.0kb downstream 12941 true Chr18: 53001330-53014270 Glycine max
Glyma.18G241400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53009271-53014270 Glycine max
Glyma.18G241400 10.0kb upstream 10.0kb upstream 17941 true Chr18: 52991330-53009270 Glycine max
Glyma.18G241400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52991330-53001329 Glycine max
Glyma.18G241400 10.0kb downstream 10.0kb downstream 17941 true Chr18: 53001330-53019270 Glycine max
Glyma.18G241400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53009271-53019270 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300578 5265 Fabidae View MSA
124066638 5270 Rosid View MSA
123740452 5271 Pentapetalae View MSA
122788674 5272 Eudicot View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5323 0.0 60.1249 High  
cufflinks 25.3953 0.0 67.7618 High  
cufflinks 16.5917 0.0 44.5635   Low
cufflinks 23.4988 0.0 62.6935 High  
cufflinks 34.6209 0.0 93.0634 High  
cufflinks 39.3927 0.0 106.577 High High
cufflinks 32.7536 0.0 87.7832 High  
cufflinks 30.8346 0.0 82.5507 High  
cufflinks 27.592 0.0 73.696 High  
cufflinks 6.811       High
cufflinks 3.671        
cufflinks 2.102       Low
cufflinks 5.398        
cufflinks 7.144     High High
cufflinks 4.531        
cufflinks 3.486        
cufflinks 3.942        
cufflinks 4.066        
cufflinks 4.944        
cufflinks 2.595       Low
cufflinks 4.436        
cufflinks 3.141        
cufflinks 4.306        
cufflinks 4.317        
cufflinks 2.622       Low
cufflinks 4.172        

0 Strain