Gene : Glyma.01G002100 G. max Wm82.a2.v1
Defline:  (1 of 36) PF02309//PF02362//PF06507 - AUX/IAA family (AUX_IAA) // B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  21
Name:  ? Glyma.01G002100 Secondary Identifier:  ? PAC:30542072
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G002100 0.5kb upstream 0.5kb upstream 6548 true Chr01: 291328-297875 Glycine max
Glyma.01G002100 0.5kb upstream 0.5kb upstream 500 false Chr01: 297376-297875 Glycine max
Glyma.01G002100 0.5kb downstream 0.5kb downstream 6548 true Chr01: 290828-297375 Glycine max
Glyma.01G002100 0.5kb downstream 0.5kb downstream 500 false Chr01: 290828-291327 Glycine max
Glyma.01G002100 1.0kb upstream 1.0kb upstream 7048 true Chr01: 291328-298375 Glycine max
Glyma.01G002100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 297376-298375 Glycine max
Glyma.01G002100 1.0kb downstream 1.0kb downstream 7048 true Chr01: 290328-297375 Glycine max
Glyma.01G002100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 290328-291327 Glycine max
Glyma.01G002100 2.0kb upstream 2.0kb upstream 8048 true Chr01: 291328-299375 Glycine max
Glyma.01G002100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 297376-299375 Glycine max
Glyma.01G002100 2.0kb downstream 2.0kb downstream 8048 true Chr01: 289328-297375 Glycine max
Glyma.01G002100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 289328-291327 Glycine max
Glyma.01G002100 5.0kb upstream 5.0kb upstream 11048 true Chr01: 291328-302375 Glycine max
Glyma.01G002100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 297376-302375 Glycine max
Glyma.01G002100 5.0kb downstream 5.0kb downstream 11048 true Chr01: 286328-297375 Glycine max
Glyma.01G002100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 286328-291327 Glycine max
Glyma.01G002100 10.0kb upstream 10.0kb upstream 16048 true Chr01: 291328-307375 Glycine max
Glyma.01G002100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 297376-307375 Glycine max
Glyma.01G002100 10.0kb downstream 10.0kb downstream 16048 true Chr01: 281328-297375 Glycine max
Glyma.01G002100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 281328-291327 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309356 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.15499 0.0 21.0314    
cufflinks 3.27755 0.0 12.0818    
cufflinks 3.38322 0.0 12.3483    
cufflinks 10.1308 0.0 34.8542   High
cufflinks 6.54891 0.0 22.3184    
cufflinks 3.64277 0.0 13.1342    
cufflinks 4.48051 0.0 15.7844    
cufflinks 7.35999 0.0 25.0121    
cufflinks 3.15919 0.0 11.7267   Low
cufflinks 1.943        
cufflinks 0.465       Low
cufflinks 1.73        
cufflinks 3.313        
cufflinks 3.194        
cufflinks 0.499       Low
cufflinks 4.508        
cufflinks 0.388       Low
cufflinks 3.174        
cufflinks 2.386        
cufflinks 5.499       High
cufflinks 0.842        
cufflinks 5.215       High
cufflinks 4.137        
cufflinks 0.706       Low
cufflinks 5.482       High
cufflinks 0.799        

0 Strain