Gene : Glyma.01G008100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21068:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIL23-RELATED Genomic Order:  81
Name:  ? Glyma.01G008100 Secondary Identifier:  ? PAC:30544449
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G008100 0.5kb upstream 0.5kb upstream 4551 true Chr01: 786597-791147 Glycine max
Glyma.01G008100 0.5kb upstream 0.5kb upstream 500 false Chr01: 786597-787096 Glycine max
Glyma.01G008100 0.5kb downstream 0.5kb downstream 4551 true Chr01: 787097-791647 Glycine max
Glyma.01G008100 0.5kb downstream 0.5kb downstream 500 false Chr01: 791148-791647 Glycine max
Glyma.01G008100 1.0kb upstream 1.0kb upstream 5051 true Chr01: 786097-791147 Glycine max
Glyma.01G008100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 786097-787096 Glycine max
Glyma.01G008100 1.0kb downstream 1.0kb downstream 5051 true Chr01: 787097-792147 Glycine max
Glyma.01G008100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 791148-792147 Glycine max
Glyma.01G008100 2.0kb upstream 2.0kb upstream 6051 true Chr01: 785097-791147 Glycine max
Glyma.01G008100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 785097-787096 Glycine max
Glyma.01G008100 2.0kb downstream 2.0kb downstream 6051 true Chr01: 787097-793147 Glycine max
Glyma.01G008100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 791148-793147 Glycine max
Glyma.01G008100 5.0kb upstream 5.0kb upstream 9051 true Chr01: 782097-791147 Glycine max
Glyma.01G008100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 782097-787096 Glycine max
Glyma.01G008100 5.0kb downstream 5.0kb downstream 9051 true Chr01: 787097-796147 Glycine max
Glyma.01G008100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 791148-796147 Glycine max
Glyma.01G008100 10.0kb upstream 10.0kb upstream 14051 true Chr01: 777097-791147 Glycine max
Glyma.01G008100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 777097-787096 Glycine max
Glyma.01G008100 10.0kb downstream 10.0kb downstream 14051 true Chr01: 787097-801147 Glycine max
Glyma.01G008100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 791148-801147 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026413 5273 Angiosperm View MSA
122296763 5265 Fabidae View MSA
124035773 5270 Rosid View MSA
123740247 5271 Pentapetalae View MSA
122787553 5272 Eudicot View MSA
121296318 5274 Embryophyte View MSA
123334500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74722 0.0 5.91549   High
cufflinks 0.23751 0.0 0.912392 Low  
cufflinks 1.59161 0.0 5.43117    
cufflinks 1.01997 0.0 3.62127    
cufflinks 0.473868 0.0 1.76301    
cufflinks 0.100828 0.0 0.400441 Low Low
cufflinks 0.304123 0.0 1.15489    
cufflinks 1.46095 0.0 5.02773    
cufflinks 1.12841 0.0 3.98074    
cufflinks 0.763        
cufflinks 0.605        
cufflinks 0.851        
cufflinks 0.177        
cufflinks 0.057     Low Low
cufflinks 0.033     Low Low
cufflinks 0.24        
cufflinks 1.754       High
cufflinks 1.248       High
cufflinks 0.119        
cufflinks 0.284        
cufflinks 0.958        
cufflinks 0.414        
cufflinks 0.145        
cufflinks 0.748        
cufflinks 0.302        
cufflinks 1.469       High

0 Strain