Gene : Glyma.01G006100 G. max Wm82.a2.v1
Defline:  (1 of 5) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase Genomic Order:  61
Name:  ? Glyma.01G006100 Secondary Identifier:  ? PAC:30543902
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G006100 0.5kb upstream 0.5kb upstream 10840 true Chr01: 588481-599320 Glycine max
Glyma.01G006100 0.5kb upstream 0.5kb upstream 500 false Chr01: 598821-599320 Glycine max
Glyma.01G006100 0.5kb downstream 0.5kb downstream 10840 true Chr01: 587981-598820 Glycine max
Glyma.01G006100 0.5kb downstream 0.5kb downstream 500 false Chr01: 587981-588480 Glycine max
Glyma.01G006100 1.0kb upstream 1.0kb upstream 11340 true Chr01: 588481-599820 Glycine max
Glyma.01G006100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 598821-599820 Glycine max
Glyma.01G006100 1.0kb downstream 1.0kb downstream 11340 true Chr01: 587481-598820 Glycine max
Glyma.01G006100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 587481-588480 Glycine max
Glyma.01G006100 2.0kb upstream 2.0kb upstream 12340 true Chr01: 588481-600820 Glycine max
Glyma.01G006100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 598821-600820 Glycine max
Glyma.01G006100 2.0kb downstream 2.0kb downstream 12340 true Chr01: 586481-598820 Glycine max
Glyma.01G006100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 586481-588480 Glycine max
Glyma.01G006100 5.0kb upstream 5.0kb upstream 15340 true Chr01: 588481-603820 Glycine max
Glyma.01G006100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 598821-603820 Glycine max
Glyma.01G006100 5.0kb downstream 5.0kb downstream 15340 true Chr01: 583481-598820 Glycine max
Glyma.01G006100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 583481-588480 Glycine max
Glyma.01G006100 10.0kb upstream 10.0kb upstream 20340 true Chr01: 588481-608820 Glycine max
Glyma.01G006100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 598821-608820 Glycine max
Glyma.01G006100 10.0kb downstream 10.0kb downstream 20340 true Chr01: 578481-598820 Glycine max
Glyma.01G006100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 578481-588480 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306333 5265 Fabidae View MSA
124068746 5270 Rosid View MSA
123739648 5271 Pentapetalae View MSA
122789806 5272 Eudicot View MSA
122042876 5273 Angiosperm View MSA
121345157 5274 Embryophyte View MSA
123426289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.942 0.0 56.2285   High
cufflinks 8.53964 0.0 27.3318    
cufflinks 14.2537 0.0 44.8538   High
cufflinks 8.55359 0.0 27.4405    
cufflinks 6.76127 0.0 21.9092    
cufflinks 3.67794 0.0 13.4024   Low
cufflinks 8.20327 0.0 26.1868    
cufflinks 5.25569 0.0 17.4795    
cufflinks 9.21206 0.0 29.4957    
cufflinks 1.053       Low
cufflinks 3.272        
cufflinks 2.074        
cufflinks 0.768       Low
cufflinks 1.038       Low
cufflinks 9.3     High High
cufflinks 3.21        
cufflinks 0.702       Low
cufflinks 1.901        
cufflinks 1.364        
cufflinks 4.043        
cufflinks 2.862        
cufflinks 3.406        
cufflinks 2.592        
cufflinks 1.829        
cufflinks 3.662        
cufflinks 1.489        

0 Strain