Gene : Glyma.18G242900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11802//PTHR11802:SF102 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  2429
Name:  ? Glyma.18G242900 Secondary Identifier:  ? PAC:30555317
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G242900 0.5kb upstream 0.5kb upstream 6752 true Chr18: 53113341-53120092 Glycine max
Glyma.18G242900 0.5kb upstream 0.5kb upstream 500 false Chr18: 53119593-53120092 Glycine max
Glyma.18G242900 0.5kb downstream 0.5kb downstream 6752 true Chr18: 53112841-53119592 Glycine max
Glyma.18G242900 0.5kb downstream 0.5kb downstream 500 false Chr18: 53112841-53113340 Glycine max
Glyma.18G242900 1.0kb upstream 1.0kb upstream 7252 true Chr18: 53113341-53120592 Glycine max
Glyma.18G242900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 53119593-53120592 Glycine max
Glyma.18G242900 1.0kb downstream 1.0kb downstream 7252 true Chr18: 53112341-53119592 Glycine max
Glyma.18G242900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 53112341-53113340 Glycine max
Glyma.18G242900 2.0kb upstream 2.0kb upstream 8252 true Chr18: 53113341-53121592 Glycine max
Glyma.18G242900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 53119593-53121592 Glycine max
Glyma.18G242900 2.0kb downstream 2.0kb downstream 8252 true Chr18: 53111341-53119592 Glycine max
Glyma.18G242900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 53111341-53113340 Glycine max
Glyma.18G242900 5.0kb upstream 5.0kb upstream 11252 true Chr18: 53113341-53124592 Glycine max
Glyma.18G242900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 53119593-53124592 Glycine max
Glyma.18G242900 5.0kb downstream 5.0kb downstream 11252 true Chr18: 53108341-53119592 Glycine max
Glyma.18G242900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 53108341-53113340 Glycine max
Glyma.18G242900 10.0kb upstream 10.0kb upstream 16252 true Chr18: 53113341-53129592 Glycine max
Glyma.18G242900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 53119593-53129592 Glycine max
Glyma.18G242900 10.0kb downstream 10.0kb downstream 16252 true Chr18: 53103341-53119592 Glycine max
Glyma.18G242900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 53103341-53113340 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041261 5273 Angiosperm View MSA
122303028 5265 Fabidae View MSA
124075112 5270 Rosid View MSA
123744248 5271 Pentapetalae View MSA
122789110 5272 Eudicot View MSA
121344496 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.8431 0.0 215.215 High High
cufflinks 6.19775 0.0 17.2059    
cufflinks 60.1391 0.0 178.588 High High
cufflinks 12.4284 0.0 33.2188    
cufflinks 9.85883 0.0 26.5463    
cufflinks 4.19543 0.0 12.1299   Low
cufflinks 6.71685 0.0 18.5158    
cufflinks 30.0113 0.0 82.1407 High  
cufflinks 34.8506 0.0 96.62 High  
cufflinks 5.869        
cufflinks 0.499       Low
cufflinks 14.794     High  
cufflinks 0.653       Low
cufflinks 0.345       Low
cufflinks 5.15        
cufflinks 21.551     High High
cufflinks 3.779        
cufflinks 5.332        
cufflinks 1.747        
cufflinks 16.068     High  
cufflinks 0.97        
cufflinks 21.705     High High
cufflinks 17.482     High High
cufflinks 1.039        
cufflinks 17.127     High High
cufflinks 2.909        

0 Strain