Gene : Glyma.01G009600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31499:SF5 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  96
Name:  ? Glyma.01G009600 Secondary Identifier:  ? PAC:30544817
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G009600 0.5kb upstream 0.5kb upstream 3671 true Chr01: 937652-941322 Glycine max
Glyma.01G009600 0.5kb upstream 0.5kb upstream 500 false Chr01: 940823-941322 Glycine max
Glyma.01G009600 0.5kb downstream 0.5kb downstream 3671 true Chr01: 937152-940822 Glycine max
Glyma.01G009600 0.5kb downstream 0.5kb downstream 500 false Chr01: 937152-937651 Glycine max
Glyma.01G009600 1.0kb upstream 1.0kb upstream 4171 true Chr01: 937652-941822 Glycine max
Glyma.01G009600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 940823-941822 Glycine max
Glyma.01G009600 1.0kb downstream 1.0kb downstream 4171 true Chr01: 936652-940822 Glycine max
Glyma.01G009600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 936652-937651 Glycine max
Glyma.01G009600 2.0kb upstream 2.0kb upstream 5171 true Chr01: 937652-942822 Glycine max
Glyma.01G009600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 940823-942822 Glycine max
Glyma.01G009600 2.0kb downstream 2.0kb downstream 5171 true Chr01: 935652-940822 Glycine max
Glyma.01G009600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 935652-937651 Glycine max
Glyma.01G009600 5.0kb upstream 5.0kb upstream 8171 true Chr01: 937652-945822 Glycine max
Glyma.01G009600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 940823-945822 Glycine max
Glyma.01G009600 5.0kb downstream 5.0kb downstream 8171 true Chr01: 932652-940822 Glycine max
Glyma.01G009600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 932652-937651 Glycine max
Glyma.01G009600 10.0kb upstream 10.0kb upstream 13171 true Chr01: 937652-950822 Glycine max
Glyma.01G009600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 940823-950822 Glycine max
Glyma.01G009600 10.0kb downstream 10.0kb downstream 13171 true Chr01: 927652-940822 Glycine max
Glyma.01G009600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 927652-937651 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307698 5265 Fabidae View MSA
124073439 5270 Rosid View MSA
123741048 5271 Pentapetalae View MSA
122787904 5272 Eudicot View MSA
122042666 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349639 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.572939 0.0 2.11923   Low
cufflinks 0.751984 0.0 2.74014    
cufflinks 0.792857 0.0 2.87237    
cufflinks 2.33241 0.0 7.64277    
cufflinks 4.85675 0.0 14.4046    
cufflinks 1.70869 0.0 5.83693    
cufflinks 0.575257 0.0 2.1295   Low
cufflinks 3.46732 0.0 10.7688    
cufflinks 15.1971 0.0 40.7568   High
cufflinks 0.645        
cufflinks 0.364       Low
cufflinks 0.843        
cufflinks 2.391        
cufflinks 4.276       High
cufflinks 25.209     High High
cufflinks 0.848        
cufflinks 0.477        
cufflinks 1.425        
cufflinks 0.83        
cufflinks 1.195        
cufflinks 0.48        
cufflinks 0.939        
cufflinks 1.021        
cufflinks 0.3       Low
cufflinks 1.31        
cufflinks 0.539        

0 Strain