Gene : Glyma.18G234700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Genomic Order:  2347
Name:  ? Glyma.18G234700 Secondary Identifier:  ? PAC:30554601
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G234700 0.5kb upstream 0.5kb upstream 12056 true Chr18: 52303444-52315499 Glycine max
Glyma.18G234700 0.5kb upstream 0.5kb upstream 500 false Chr18: 52303444-52303943 Glycine max
Glyma.18G234700 0.5kb downstream 0.5kb downstream 12056 true Chr18: 52303944-52315999 Glycine max
Glyma.18G234700 0.5kb downstream 0.5kb downstream 500 false Chr18: 52315500-52315999 Glycine max
Glyma.18G234700 1.0kb upstream 1.0kb upstream 12556 true Chr18: 52302944-52315499 Glycine max
Glyma.18G234700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 52302944-52303943 Glycine max
Glyma.18G234700 1.0kb downstream 1.0kb downstream 12556 true Chr18: 52303944-52316499 Glycine max
Glyma.18G234700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 52315500-52316499 Glycine max
Glyma.18G234700 2.0kb upstream 2.0kb upstream 13556 true Chr18: 52301944-52315499 Glycine max
Glyma.18G234700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52301944-52303943 Glycine max
Glyma.18G234700 2.0kb downstream 2.0kb downstream 13556 true Chr18: 52303944-52317499 Glycine max
Glyma.18G234700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 52315500-52317499 Glycine max
Glyma.18G234700 5.0kb upstream 5.0kb upstream 16556 true Chr18: 52298944-52315499 Glycine max
Glyma.18G234700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52298944-52303943 Glycine max
Glyma.18G234700 5.0kb downstream 5.0kb downstream 16556 true Chr18: 52303944-52320499 Glycine max
Glyma.18G234700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 52315500-52320499 Glycine max
Glyma.18G234700 10.0kb upstream 10.0kb upstream 21556 true Chr18: 52293944-52315499 Glycine max
Glyma.18G234700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52293944-52303943 Glycine max
Glyma.18G234700 10.0kb downstream 10.0kb downstream 21556 true Chr18: 52303944-52325499 Glycine max
Glyma.18G234700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 52315500-52325499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656128 5273 Angiosperm View MSA
122297518 5265 Fabidae View MSA
124036054 5270 Rosid View MSA
123609466 5271 Pentapetalae View MSA
122644114 5272 Eudicot View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.11849 0.0 11.0001    
cufflinks 4.4113 0.0 11.7952    
cufflinks 4.9261 0.0 13.2297    
cufflinks 5.21622 0.0 14.0304    
cufflinks 3.97506 0.0 10.6113    
cufflinks 2.97288 0.0 7.94403   Low
cufflinks 9.61554 0.0 27.0482   High
cufflinks 4.78181 0.0 12.82    
cufflinks 4.27504 0.0 11.4243    
cufflinks 4.323        
cufflinks 2.208       Low
cufflinks 5.458        
cufflinks 4.117        
cufflinks 3.896        
cufflinks 2.031       Low
cufflinks 5.573        
cufflinks 2.477       Low
cufflinks 7.629     High High
cufflinks 7.257       High
cufflinks 5.234        
cufflinks 2.228       Low
cufflinks 5.772        
cufflinks 5.127        
cufflinks 2.983        
cufflinks 5.245        
cufflinks 3.493        

0 Strain