Gene : Glyma.01G171900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31451:SF8 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED Genomic Order:  1719
Name:  ? Glyma.01G171900 Secondary Identifier:  ? PAC:30543923
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G171900 0.5kb upstream 0.5kb upstream 3435 true Chr01: 50912520-50915954 Glycine max
Glyma.01G171900 0.5kb upstream 0.5kb upstream 500 false Chr01: 50915455-50915954 Glycine max
Glyma.01G171900 0.5kb downstream 0.5kb downstream 3435 true Chr01: 50912020-50915454 Glycine max
Glyma.01G171900 0.5kb downstream 0.5kb downstream 500 false Chr01: 50912020-50912519 Glycine max
Glyma.01G171900 1.0kb upstream 1.0kb upstream 3935 true Chr01: 50912520-50916454 Glycine max
Glyma.01G171900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50915455-50916454 Glycine max
Glyma.01G171900 1.0kb downstream 1.0kb downstream 3935 true Chr01: 50911520-50915454 Glycine max
Glyma.01G171900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50911520-50912519 Glycine max
Glyma.01G171900 2.0kb upstream 2.0kb upstream 4935 true Chr01: 50912520-50917454 Glycine max
Glyma.01G171900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50915455-50917454 Glycine max
Glyma.01G171900 2.0kb downstream 2.0kb downstream 4935 true Chr01: 50910520-50915454 Glycine max
Glyma.01G171900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50910520-50912519 Glycine max
Glyma.01G171900 5.0kb upstream 5.0kb upstream 7935 true Chr01: 50912520-50920454 Glycine max
Glyma.01G171900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50915455-50920454 Glycine max
Glyma.01G171900 5.0kb downstream 5.0kb downstream 7935 true Chr01: 50907520-50915454 Glycine max
Glyma.01G171900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50907520-50912519 Glycine max
Glyma.01G171900 10.0kb upstream 10.0kb upstream 12935 true Chr01: 50912520-50925454 Glycine max
Glyma.01G171900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50915455-50925454 Glycine max
Glyma.01G171900 10.0kb downstream 10.0kb downstream 12935 true Chr01: 50902520-50915454 Glycine max
Glyma.01G171900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50902520-50912519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299710 5265 Fabidae View MSA
124070975 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.85223 0.0 22.1692    
cufflinks 10.8261 0.0 38.4023    
cufflinks 2.03656 0.0 7.05655   Low
cufflinks 11.5036 0.0 34.6697    
cufflinks 11.7735 0.0 41.6239    
cufflinks 5.37888 0.0 21.2542    
cufflinks 3.90802 0.0 14.6157    
cufflinks 22.9302 0.0 80.8367 High High
cufflinks 3.98776 0.0 14.7881    
cufflinks 8.826     High High
cufflinks 0.253       Low
cufflinks 1.394        
cufflinks 0.695        
cufflinks 0.55        
cufflinks 0.073       Low
cufflinks 9.659     High High
cufflinks 0.851        
cufflinks 5.014        
cufflinks 3.514        
cufflinks 9.258     High High
cufflinks 0.622        
cufflinks 10.372     High High
cufflinks 6.896        
cufflinks 0.357       Low
cufflinks 9.339     High High
cufflinks 0.607        

0 Strain