Gene : Glyma.01G169900 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Genomic Order:  1699
Name:  ? Glyma.01G169900 Secondary Identifier:  ? PAC:30544375
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G169900 0.5kb upstream 0.5kb upstream 4444 true Chr01: 50734121-50738564 Glycine max
Glyma.01G169900 0.5kb upstream 0.5kb upstream 500 false Chr01: 50734121-50734620 Glycine max
Glyma.01G169900 0.5kb downstream 0.5kb downstream 4444 true Chr01: 50734621-50739064 Glycine max
Glyma.01G169900 0.5kb downstream 0.5kb downstream 500 false Chr01: 50738565-50739064 Glycine max
Glyma.01G169900 1.0kb upstream 1.0kb upstream 4944 true Chr01: 50733621-50738564 Glycine max
Glyma.01G169900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50733621-50734620 Glycine max
Glyma.01G169900 1.0kb downstream 1.0kb downstream 4944 true Chr01: 50734621-50739564 Glycine max
Glyma.01G169900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50738565-50739564 Glycine max
Glyma.01G169900 2.0kb upstream 2.0kb upstream 5944 true Chr01: 50732621-50738564 Glycine max
Glyma.01G169900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50732621-50734620 Glycine max
Glyma.01G169900 2.0kb downstream 2.0kb downstream 5944 true Chr01: 50734621-50740564 Glycine max
Glyma.01G169900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50738565-50740564 Glycine max
Glyma.01G169900 5.0kb upstream 5.0kb upstream 8944 true Chr01: 50729621-50738564 Glycine max
Glyma.01G169900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50729621-50734620 Glycine max
Glyma.01G169900 5.0kb downstream 5.0kb downstream 8944 true Chr01: 50734621-50743564 Glycine max
Glyma.01G169900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50738565-50743564 Glycine max
Glyma.01G169900 10.0kb upstream 10.0kb upstream 13944 true Chr01: 50724621-50738564 Glycine max
Glyma.01G169900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50724621-50734620 Glycine max
Glyma.01G169900 10.0kb downstream 10.0kb downstream 13944 true Chr01: 50734621-50748564 Glycine max
Glyma.01G169900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50738565-50748564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303452 5265 Fabidae View MSA
124062354 5270 Rosid View MSA
123737410 5271 Pentapetalae View MSA
122792758 5272 Eudicot View MSA
122047649 5273 Angiosperm View MSA
121350864 5274 Embryophyte View MSA
123427541 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.3403 0.0 17.2981   High
cufflinks 5.3828 0.0 14.8601   High
cufflinks 1.41009 0.0 4.6013   Low
cufflinks 3.36486 0.0 9.75388    
cufflinks 2.87385 0.0 8.5162    
cufflinks 1.6689 0.0 5.33674   Low
cufflinks 4.10382 0.0 11.6435    
cufflinks 2.53706 0.0 7.63593    
cufflinks 2.07472 0.0 6.42918    
cufflinks 1.68        
cufflinks 0.252       Low
cufflinks 1.737        
cufflinks 1.702        
cufflinks 2.147        
cufflinks 0.262       Low
cufflinks 6.733       High
cufflinks 0.259       Low
cufflinks 2.334        
cufflinks 3.59        
cufflinks 7.993     High High
cufflinks 0.279       Low
cufflinks 7.603     High High
cufflinks 7.74     High High
cufflinks 0.281       Low
cufflinks 6.824       High
cufflinks 0.287       Low

0 Strain