Gene : Glyma.01G169800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11748:SF90 - D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  1698
Name:  ? Glyma.01G169800 Secondary Identifier:  ? PAC:30543515
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G169800 0.5kb upstream 0.5kb upstream 7760 true Chr01: 50726088-50733847 Glycine max
Glyma.01G169800 0.5kb upstream 0.5kb upstream 500 false Chr01: 50733348-50733847 Glycine max
Glyma.01G169800 0.5kb downstream 0.5kb downstream 7760 true Chr01: 50725588-50733347 Glycine max
Glyma.01G169800 0.5kb downstream 0.5kb downstream 500 false Chr01: 50725588-50726087 Glycine max
Glyma.01G169800 1.0kb upstream 1.0kb upstream 8260 true Chr01: 50726088-50734347 Glycine max
Glyma.01G169800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50733348-50734347 Glycine max
Glyma.01G169800 1.0kb downstream 1.0kb downstream 8260 true Chr01: 50725088-50733347 Glycine max
Glyma.01G169800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50725088-50726087 Glycine max
Glyma.01G169800 2.0kb upstream 2.0kb upstream 9260 true Chr01: 50726088-50735347 Glycine max
Glyma.01G169800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50733348-50735347 Glycine max
Glyma.01G169800 2.0kb downstream 2.0kb downstream 9260 true Chr01: 50724088-50733347 Glycine max
Glyma.01G169800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50724088-50726087 Glycine max
Glyma.01G169800 5.0kb upstream 5.0kb upstream 12260 true Chr01: 50726088-50738347 Glycine max
Glyma.01G169800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50733348-50738347 Glycine max
Glyma.01G169800 5.0kb downstream 5.0kb downstream 12260 true Chr01: 50721088-50733347 Glycine max
Glyma.01G169800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50721088-50726087 Glycine max
Glyma.01G169800 10.0kb upstream 10.0kb upstream 17260 true Chr01: 50726088-50743347 Glycine max
Glyma.01G169800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50733348-50743347 Glycine max
Glyma.01G169800 10.0kb downstream 10.0kb downstream 17260 true Chr01: 50716088-50733347 Glycine max
Glyma.01G169800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50716088-50726087 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301190 5265 Fabidae View MSA
124066873 5270 Rosid View MSA
123743923 5271 Pentapetalae View MSA
122792019 5272 Eudicot View MSA
122041768 5273 Angiosperm View MSA
121347164 5274 Embryophyte View MSA
123425580 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.73251 0.0 22.0725    
cufflinks 5.32177 0.0 20.8209    
cufflinks 30.8187 0.0 110.768 High High
cufflinks 4.65102 0.0 19.0278    
cufflinks 4.40042 0.0 15.6946    
cufflinks 5.66203 0.0 21.803    
cufflinks 9.80292 0.0 34.3294    
cufflinks 2.92008 0.0 12.0493   Low
cufflinks 4.15881 0.0 17.8956    
cufflinks 0.749        
cufflinks 0.563        
cufflinks 2.603       High
cufflinks 0.923        
cufflinks 0.92        
cufflinks 0.432       Low
cufflinks 0.661        
cufflinks 0.295       Low
cufflinks 1.736       High
cufflinks 0.88        
cufflinks 0.839        
cufflinks 0.609        
cufflinks 0.79        
cufflinks 0.593        
cufflinks 0.848        
cufflinks 0.76        
cufflinks 0.572        

0 Strain