Gene : Glyma.01G166400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11139:SF1 - TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN Genomic Order:  1664
Name:  ? Glyma.01G166400 Secondary Identifier:  ? PAC:30542873
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G166400 0.5kb upstream 0.5kb upstream 32017 true Chr01: 50404781-50436797 Glycine max
Glyma.01G166400 0.5kb upstream 0.5kb upstream 500 false Chr01: 50436298-50436797 Glycine max
Glyma.01G166400 0.5kb downstream 0.5kb downstream 32017 true Chr01: 50404281-50436297 Glycine max
Glyma.01G166400 0.5kb downstream 0.5kb downstream 500 false Chr01: 50404281-50404780 Glycine max
Glyma.01G166400 1.0kb upstream 1.0kb upstream 32517 true Chr01: 50404781-50437297 Glycine max
Glyma.01G166400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50436298-50437297 Glycine max
Glyma.01G166400 1.0kb downstream 1.0kb downstream 32517 true Chr01: 50403781-50436297 Glycine max
Glyma.01G166400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50403781-50404780 Glycine max
Glyma.01G166400 2.0kb upstream 2.0kb upstream 33517 true Chr01: 50404781-50438297 Glycine max
Glyma.01G166400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50436298-50438297 Glycine max
Glyma.01G166400 2.0kb downstream 2.0kb downstream 33517 true Chr01: 50402781-50436297 Glycine max
Glyma.01G166400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50402781-50404780 Glycine max
Glyma.01G166400 5.0kb upstream 5.0kb upstream 36517 true Chr01: 50404781-50441297 Glycine max
Glyma.01G166400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50436298-50441297 Glycine max
Glyma.01G166400 5.0kb downstream 5.0kb downstream 36517 true Chr01: 50399781-50436297 Glycine max
Glyma.01G166400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50399781-50404780 Glycine max
Glyma.01G166400 10.0kb upstream 10.0kb upstream 41517 true Chr01: 50404781-50446297 Glycine max
Glyma.01G166400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50436298-50446297 Glycine max
Glyma.01G166400 10.0kb downstream 10.0kb downstream 41517 true Chr01: 50394781-50436297 Glycine max
Glyma.01G166400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50394781-50404780 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027431 5273 Angiosperm View MSA
122300725 5265 Fabidae View MSA
124067016 5270 Rosid View MSA
123737923 5271 Pentapetalae View MSA
122791578 5272 Eudicot View MSA
121344769 5274 Embryophyte View MSA
123424018 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.27744 0.0 20.6802    
cufflinks 5.98532 0.0 16.6683    
cufflinks 9.65049 0.0 28.612   High
cufflinks 6.63768 0.0 18.697    
cufflinks 3.97939 0.0 10.7387    
cufflinks 2.8495 0.0 7.61081   Low
cufflinks 7.86885 0.0 22.5513    
cufflinks 4.7402 0.0 12.9492    
cufflinks 6.06398 0.0 16.9163    
cufflinks 1.991        
cufflinks 1.951       Low
cufflinks 4.057        
cufflinks 1.867       Low
cufflinks 1.667       Low
cufflinks 2.702        
cufflinks 3.705        
cufflinks 1.928       Low
cufflinks 3.917        
cufflinks 4.729       High
cufflinks 4.305       High
cufflinks 1.966       Low
cufflinks 4.284       High
cufflinks 3.115        
cufflinks 2.374        
cufflinks 4.095       High
cufflinks 2.682        

0 Strain