Gene : Glyma.01G166000 G. max Wm82.a2.v1

Defline:  (1 of 253) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1660
Name:  ? Glyma.01G166000 Secondary Identifier:  ? PAC:30543524

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G166000 0.5kb upstream 0.5kb upstream 1865 true Chr01: 50355756-50357620 Glycine max
Glyma.01G166000 0.5kb upstream 0.5kb upstream 500 false Chr01: 50357121-50357620 Glycine max
Glyma.01G166000 0.5kb downstream 0.5kb downstream 1865 true Chr01: 50355256-50357120 Glycine max
Glyma.01G166000 0.5kb downstream 0.5kb downstream 500 false Chr01: 50355256-50355755 Glycine max
Glyma.01G166000 1.0kb upstream 1.0kb upstream 2365 true Chr01: 50355756-50358120 Glycine max
Glyma.01G166000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 50357121-50358120 Glycine max
Glyma.01G166000 1.0kb downstream 1.0kb downstream 2365 true Chr01: 50354756-50357120 Glycine max
Glyma.01G166000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 50354756-50355755 Glycine max
Glyma.01G166000 2.0kb upstream 2.0kb upstream 3365 true Chr01: 50355756-50359120 Glycine max
Glyma.01G166000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 50357121-50359120 Glycine max
Glyma.01G166000 2.0kb downstream 2.0kb downstream 3365 true Chr01: 50353756-50357120 Glycine max
Glyma.01G166000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 50353756-50355755 Glycine max
Glyma.01G166000 5.0kb upstream 5.0kb upstream 6365 true Chr01: 50355756-50362120 Glycine max
Glyma.01G166000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 50357121-50362120 Glycine max
Glyma.01G166000 5.0kb downstream 5.0kb downstream 6365 true Chr01: 50350756-50357120 Glycine max
Glyma.01G166000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 50350756-50355755 Glycine max
Glyma.01G166000 10.0kb upstream 10.0kb upstream 11365 true Chr01: 50355756-50367120 Glycine max
Glyma.01G166000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 50357121-50367120 Glycine max
Glyma.01G166000 10.0kb downstream 10.0kb downstream 11365 true Chr01: 50345756-50357120 Glycine max
Glyma.01G166000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 50345756-50355755 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311545 5265 Fabidae View MSA
124071980 5270 Rosid View MSA
123753518 5271 Pentapetalae View MSA
122797813 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.7483 0.0 167.397 High High
cufflinks 1.61091 0.0 5.67982    
cufflinks 38.7357 0.0 103.804 High High
cufflinks 1.42688 0.0 5.07951   Low
cufflinks 12.9073 0.0 35.3808    
cufflinks 18.5519 0.0 49.8916    
cufflinks 0.672773 0.0 2.50515   Low
cufflinks 3.25859 0.0 10.6641    
cufflinks 16.3553 0.0 44.2294    
cufflinks 8.793     High  
cufflinks 95.687     High High
cufflinks 25.996     High  
cufflinks 6.841       Low
cufflinks 5.05       Low
cufflinks 89.028     High High
cufflinks 36.173     High  
cufflinks 23.232     High  
cufflinks 18.801     High  
cufflinks 3.171       Low
cufflinks 36.565     High  
cufflinks 121.911     High High
cufflinks 15.716     High  
cufflinks 6.346       Low
cufflinks 92.982     High High
cufflinks 35.389     High  
cufflinks 99.06     High High

0 Strain