Gene : Glyma.01G175300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF606 - PROTEIN PQN-21, ISOFORM B Genomic Order:  1753
Name:  ? Glyma.01G175300 Secondary Identifier:  ? PAC:30543517
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G175300 0.5kb upstream 0.5kb upstream 6939 true Chr01: 51182560-51189498 Glycine max
Glyma.01G175300 0.5kb upstream 0.5kb upstream 500 false Chr01: 51182560-51183059 Glycine max
Glyma.01G175300 0.5kb downstream 0.5kb downstream 6939 true Chr01: 51183060-51189998 Glycine max
Glyma.01G175300 0.5kb downstream 0.5kb downstream 500 false Chr01: 51189499-51189998 Glycine max
Glyma.01G175300 1.0kb upstream 1.0kb upstream 7439 true Chr01: 51182060-51189498 Glycine max
Glyma.01G175300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51182060-51183059 Glycine max
Glyma.01G175300 1.0kb downstream 1.0kb downstream 7439 true Chr01: 51183060-51190498 Glycine max
Glyma.01G175300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51189499-51190498 Glycine max
Glyma.01G175300 2.0kb upstream 2.0kb upstream 8439 true Chr01: 51181060-51189498 Glycine max
Glyma.01G175300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51181060-51183059 Glycine max
Glyma.01G175300 2.0kb downstream 2.0kb downstream 8439 true Chr01: 51183060-51191498 Glycine max
Glyma.01G175300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51189499-51191498 Glycine max
Glyma.01G175300 5.0kb upstream 5.0kb upstream 11439 true Chr01: 51178060-51189498 Glycine max
Glyma.01G175300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51178060-51183059 Glycine max
Glyma.01G175300 5.0kb downstream 5.0kb downstream 11439 true Chr01: 51183060-51194498 Glycine max
Glyma.01G175300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51189499-51194498 Glycine max
Glyma.01G175300 10.0kb upstream 10.0kb upstream 16439 true Chr01: 51173060-51189498 Glycine max
Glyma.01G175300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51173060-51183059 Glycine max
Glyma.01G175300 10.0kb downstream 10.0kb downstream 16439 true Chr01: 51183060-51199498 Glycine max
Glyma.01G175300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51189499-51199498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306221 5265 Fabidae View MSA
124067846 5270 Rosid View MSA
123741401 5271 Pentapetalae View MSA
122792521 5272 Eudicot View MSA
122043835 5273 Angiosperm View MSA
121346038 5274 Embryophyte View MSA
123424281 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56458 0.0 4.9278   Low
cufflinks 17.2956 0.0 46.8153   High
cufflinks 2.63901 0.0 7.6793    
cufflinks 2.05652 0.0 6.2065    
cufflinks 7.33482 0.0 19.6959    
cufflinks 5.0521 0.0 13.838    
cufflinks 1.76011 0.0 5.46918    
cufflinks 2.85253 0.0 8.24354    
cufflinks 4.37458 0.0 12.1089    
cufflinks 1.991        
cufflinks 0.549       Low
cufflinks 3.444        
cufflinks 5.867        
cufflinks 7.055     High High
cufflinks 0.132       Low
cufflinks 2.877        
cufflinks 1.162        
cufflinks 2.04        
cufflinks 15.573     High High
cufflinks 1.656        
cufflinks 0.611        
cufflinks 2.422        
cufflinks 5.745        
cufflinks 0.567       Low
cufflinks 2.117        
cufflinks 1.498        

0 Strain