Gene : Glyma.01G190000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00307//PF03271 - Calponin homology (CH) domain (CH) // EB1-like C-terminal motif (EB1) Genomic Order:  1900
Name:  ? Glyma.01G190000 Secondary Identifier:  ? PAC:30541921
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G190000 0.5kb upstream 0.5kb upstream 2622 true Chr01: 52475965-52478586 Glycine max
Glyma.01G190000 0.5kb upstream 0.5kb upstream 500 false Chr01: 52478087-52478586 Glycine max
Glyma.01G190000 0.5kb downstream 0.5kb downstream 2622 true Chr01: 52475465-52478086 Glycine max
Glyma.01G190000 0.5kb downstream 0.5kb downstream 500 false Chr01: 52475465-52475964 Glycine max
Glyma.01G190000 1.0kb upstream 1.0kb upstream 3122 true Chr01: 52475965-52479086 Glycine max
Glyma.01G190000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52478087-52479086 Glycine max
Glyma.01G190000 1.0kb downstream 1.0kb downstream 3122 true Chr01: 52474965-52478086 Glycine max
Glyma.01G190000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52474965-52475964 Glycine max
Glyma.01G190000 2.0kb upstream 2.0kb upstream 4122 true Chr01: 52475965-52480086 Glycine max
Glyma.01G190000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52478087-52480086 Glycine max
Glyma.01G190000 2.0kb downstream 2.0kb downstream 4122 true Chr01: 52473965-52478086 Glycine max
Glyma.01G190000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52473965-52475964 Glycine max
Glyma.01G190000 5.0kb upstream 5.0kb upstream 7122 true Chr01: 52475965-52483086 Glycine max
Glyma.01G190000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52478087-52483086 Glycine max
Glyma.01G190000 5.0kb downstream 5.0kb downstream 7122 true Chr01: 52470965-52478086 Glycine max
Glyma.01G190000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52470965-52475964 Glycine max
Glyma.01G190000 10.0kb upstream 10.0kb upstream 12122 true Chr01: 52475965-52488086 Glycine max
Glyma.01G190000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52478087-52488086 Glycine max
Glyma.01G190000 10.0kb downstream 10.0kb downstream 12122 true Chr01: 52465965-52478086 Glycine max
Glyma.01G190000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52465965-52475964 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304498 5265 Fabidae View MSA
124060698 5270 Rosid View MSA
123746980 5271 Pentapetalae View MSA
122791454 5272 Eudicot View MSA
122044104 5273 Angiosperm View MSA
121351691 5274 Embryophyte View MSA
123424537 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.179608 0.0 0.698862 Low Low
cufflinks 14.6896 0.0 39.4047    
cufflinks 1.84721 0.0 6.2314    
cufflinks 5.60246 0.0 16.2194    
cufflinks 9.59003 0.0 26.2933    
cufflinks 9.56074 0.0 26.2548    
cufflinks 9.36219 0.0 25.7461    
cufflinks 8.3257 0.0 23.0916    
cufflinks 9.97663 0.0 27.2962    
cufflinks 7.398        
cufflinks 0.79       Low
cufflinks 5.129        
cufflinks 12.123     High  
cufflinks 13.971     High  
cufflinks 0.122       Low
cufflinks 9.663     High  
cufflinks 1.854        
cufflinks 3.451        
cufflinks 13.264     High  
cufflinks 6.744        
cufflinks 1.262        
cufflinks 9.343     High  
cufflinks 15.817     High High
cufflinks 0.704       Low
cufflinks 6.49        
cufflinks 1.96        

0 Strain