Gene : Glyma.01G187400 G. max Wm82.a2.v1
Defline:  (1 of 1) PF12254 - DNA polymerase alpha subunit p180 N terminal (DNA_pol_alpha_N) Genomic Order:  1874
Name:  ? Glyma.01G187400 Secondary Identifier:  ? PAC:30544482
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G187400 0.5kb upstream 0.5kb upstream 13982 true Chr01: 52249933-52263914 Glycine max
Glyma.01G187400 0.5kb upstream 0.5kb upstream 500 false Chr01: 52249933-52250432 Glycine max
Glyma.01G187400 0.5kb downstream 0.5kb downstream 13982 true Chr01: 52250433-52264414 Glycine max
Glyma.01G187400 0.5kb downstream 0.5kb downstream 500 false Chr01: 52263915-52264414 Glycine max
Glyma.01G187400 1.0kb upstream 1.0kb upstream 14482 true Chr01: 52249433-52263914 Glycine max
Glyma.01G187400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52249433-52250432 Glycine max
Glyma.01G187400 1.0kb downstream 1.0kb downstream 14482 true Chr01: 52250433-52264914 Glycine max
Glyma.01G187400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52263915-52264914 Glycine max
Glyma.01G187400 2.0kb upstream 2.0kb upstream 15482 true Chr01: 52248433-52263914 Glycine max
Glyma.01G187400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52248433-52250432 Glycine max
Glyma.01G187400 2.0kb downstream 2.0kb downstream 15482 true Chr01: 52250433-52265914 Glycine max
Glyma.01G187400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52263915-52265914 Glycine max
Glyma.01G187400 5.0kb upstream 5.0kb upstream 18482 true Chr01: 52245433-52263914 Glycine max
Glyma.01G187400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52245433-52250432 Glycine max
Glyma.01G187400 5.0kb downstream 5.0kb downstream 18482 true Chr01: 52250433-52268914 Glycine max
Glyma.01G187400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52263915-52268914 Glycine max
Glyma.01G187400 10.0kb upstream 10.0kb upstream 23482 true Chr01: 52240433-52263914 Glycine max
Glyma.01G187400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52240433-52250432 Glycine max
Glyma.01G187400 10.0kb downstream 10.0kb downstream 23482 true Chr01: 52250433-52273914 Glycine max
Glyma.01G187400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52263915-52273914 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305193 5265 Fabidae View MSA
124063602 5270 Rosid View MSA
123740668 5271 Pentapetalae View MSA
122786183 5272 Eudicot View MSA
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.880256 0.0 2.74766   Low
cufflinks 11.793 0.0 32.4594   High
cufflinks 1.60699 0.0 4.61314    
cufflinks 3.17148 0.0 8.58619    
cufflinks 7.32813 0.0 19.6367    
cufflinks 2.23757 0.0 6.21326    
cufflinks 3.5786 0.0 9.64267    
cufflinks 3.82407 0.0 10.2694    
cufflinks 5.58528 0.0 14.9011    
cufflinks 3.311        
cufflinks 0.588       Low
cufflinks 2.255        
cufflinks 4.916        
cufflinks 5.289       High
cufflinks 0.695       Low
cufflinks 3.898        
cufflinks 0.954       Low
cufflinks 1.639        
cufflinks 10.011     High High
cufflinks 2.293        
cufflinks 1.004        
cufflinks 2.873        
cufflinks 6.663       High
cufflinks 0.943       Low
cufflinks 2.845        
cufflinks 1.455        

0 Strain