Gene : Glyma.18G236200 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2147 - Nucleolar protein involved in 40S ribosome biogenesis Genomic Order:  2362
Name:  ? Glyma.18G236200 Secondary Identifier:  ? PAC:30558124
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G236200 0.5kb upstream 0.5kb upstream 6893 true Chr18: 52463828-52470720 Glycine max
Glyma.18G236200 0.5kb upstream 0.5kb upstream 500 false Chr18: 52463828-52464327 Glycine max
Glyma.18G236200 0.5kb downstream 0.5kb downstream 6893 true Chr18: 52464328-52471220 Glycine max
Glyma.18G236200 0.5kb downstream 0.5kb downstream 500 false Chr18: 52470721-52471220 Glycine max
Glyma.18G236200 1.0kb upstream 1.0kb upstream 7393 true Chr18: 52463328-52470720 Glycine max
Glyma.18G236200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 52463328-52464327 Glycine max
Glyma.18G236200 1.0kb downstream 1.0kb downstream 7393 true Chr18: 52464328-52471720 Glycine max
Glyma.18G236200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 52470721-52471720 Glycine max
Glyma.18G236200 2.0kb upstream 2.0kb upstream 8393 true Chr18: 52462328-52470720 Glycine max
Glyma.18G236200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 52462328-52464327 Glycine max
Glyma.18G236200 2.0kb downstream 2.0kb downstream 8393 true Chr18: 52464328-52472720 Glycine max
Glyma.18G236200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 52470721-52472720 Glycine max
Glyma.18G236200 5.0kb upstream 5.0kb upstream 11393 true Chr18: 52459328-52470720 Glycine max
Glyma.18G236200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 52459328-52464327 Glycine max
Glyma.18G236200 5.0kb downstream 5.0kb downstream 11393 true Chr18: 52464328-52475720 Glycine max
Glyma.18G236200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 52470721-52475720 Glycine max
Glyma.18G236200 10.0kb upstream 10.0kb upstream 16393 true Chr18: 52454328-52470720 Glycine max
Glyma.18G236200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 52454328-52464327 Glycine max
Glyma.18G236200 10.0kb downstream 10.0kb downstream 16393 true Chr18: 52464328-52480720 Glycine max
Glyma.18G236200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 52470721-52480720 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300673 5265 Fabidae View MSA
124062623 5270 Rosid View MSA
123739161 5271 Pentapetalae View MSA
122790184 5272 Eudicot View MSA
122042772 5273 Angiosperm View MSA
121345661 5274 Embryophyte View MSA
123423949 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117947 0.0 0.457346 Low  
cufflinks 0.180448 0.0 0.68631 Low  
cufflinks 0.0924548 0.0 0.361125 Low  
cufflinks 0.0406196 0.0 0.163773 Low Low
cufflinks 1.01081 0.0 3.45338   High
cufflinks 0.965386 0.0 3.31031   High
cufflinks 1.23559 0.0 4.12635   High
cufflinks 0.0758389 0.0 0.298826 Low  
cufflinks 0.687263 0.0 2.42768    
cufflinks 0.163        
cufflinks 0.431        
cufflinks 0.143        
cufflinks 1.395       High
cufflinks 0.341        
cufflinks 0.192        
cufflinks 0.089     Low Low
cufflinks 0.852       High
cufflinks 0.094     Low Low
cufflinks 0.541        
cufflinks 0.087     Low Low
cufflinks 0.405        
cufflinks 0.081     Low Low
cufflinks 0.283        
cufflinks 0.222        
cufflinks 0.079     Low Low
cufflinks 0.65       High

0 Strain