Gene : Glyma.01G177600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR30546:SF3 - MINOR ALLERGEN Genomic Order:  1776
Name:  ? Glyma.01G177600 Secondary Identifier:  ? PAC:30542493
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G177600 0.5kb upstream 0.5kb upstream 2961 true Chr01: 51407559-51410519 Glycine max
Glyma.01G177600 0.5kb upstream 0.5kb upstream 500 false Chr01: 51407559-51408058 Glycine max
Glyma.01G177600 0.5kb downstream 0.5kb downstream 2961 true Chr01: 51408059-51411019 Glycine max
Glyma.01G177600 0.5kb downstream 0.5kb downstream 500 false Chr01: 51410520-51411019 Glycine max
Glyma.01G177600 1.0kb upstream 1.0kb upstream 3461 true Chr01: 51407059-51410519 Glycine max
Glyma.01G177600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51407059-51408058 Glycine max
Glyma.01G177600 1.0kb downstream 1.0kb downstream 3461 true Chr01: 51408059-51411519 Glycine max
Glyma.01G177600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51410520-51411519 Glycine max
Glyma.01G177600 2.0kb upstream 2.0kb upstream 4461 true Chr01: 51406059-51410519 Glycine max
Glyma.01G177600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51406059-51408058 Glycine max
Glyma.01G177600 2.0kb downstream 2.0kb downstream 4461 true Chr01: 51408059-51412519 Glycine max
Glyma.01G177600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51410520-51412519 Glycine max
Glyma.01G177600 5.0kb upstream 5.0kb upstream 7461 true Chr01: 51403059-51410519 Glycine max
Glyma.01G177600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51403059-51408058 Glycine max
Glyma.01G177600 5.0kb downstream 5.0kb downstream 7461 true Chr01: 51408059-51415519 Glycine max
Glyma.01G177600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51410520-51415519 Glycine max
Glyma.01G177600 10.0kb upstream 10.0kb upstream 12461 true Chr01: 51398059-51410519 Glycine max
Glyma.01G177600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51398059-51408058 Glycine max
Glyma.01G177600 10.0kb downstream 10.0kb downstream 12461 true Chr01: 51408059-51420519 Glycine max
Glyma.01G177600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51410520-51420519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.396 0.0 13.1886    
cufflinks 4.72279 0.0 14.1346    
cufflinks 16.2177 0.0 43.4959    
cufflinks 9.18605 0.0 25.4093    
cufflinks 7.78522 0.0 21.7168    
cufflinks 25.2508 0.0 67.5119 High High
cufflinks 2.29511 0.0 7.53582   Low
cufflinks 23.4567 0.0 62.6061 High High
cufflinks 9.38746 0.0 25.8686    
cufflinks 7.594     High High
cufflinks 1.733        
cufflinks 3.947       High
cufflinks 3.582        
cufflinks 1.007       Low
cufflinks 4.188       High
cufflinks 1.552        
cufflinks 3.546        
cufflinks 1.855        
cufflinks 2.52        
cufflinks 2.005        
cufflinks 1.792        
cufflinks 1.709        
cufflinks 1.944        
cufflinks 0.837       Low
cufflinks 1.804        
cufflinks 1.791        

0 Strain