Gene : Glyma.01G199200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31747:SF1 - PROTEIN LOL1 Genomic Order:  1992
Name:  ? Glyma.01G199200 Secondary Identifier:  ? PAC:30542217
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G199200 0.5kb upstream 0.5kb upstream 3235 true Chr01: 53307594-53310828 Glycine max
Glyma.01G199200 0.5kb upstream 0.5kb upstream 500 false Chr01: 53310329-53310828 Glycine max
Glyma.01G199200 0.5kb downstream 0.5kb downstream 3235 true Chr01: 53307094-53310328 Glycine max
Glyma.01G199200 0.5kb downstream 0.5kb downstream 500 false Chr01: 53307094-53307593 Glycine max
Glyma.01G199200 1.0kb upstream 1.0kb upstream 3735 true Chr01: 53307594-53311328 Glycine max
Glyma.01G199200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 53310329-53311328 Glycine max
Glyma.01G199200 1.0kb downstream 1.0kb downstream 3735 true Chr01: 53306594-53310328 Glycine max
Glyma.01G199200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 53306594-53307593 Glycine max
Glyma.01G199200 2.0kb upstream 2.0kb upstream 4735 true Chr01: 53307594-53312328 Glycine max
Glyma.01G199200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53310329-53312328 Glycine max
Glyma.01G199200 2.0kb downstream 2.0kb downstream 4735 true Chr01: 53305594-53310328 Glycine max
Glyma.01G199200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 53305594-53307593 Glycine max
Glyma.01G199200 5.0kb upstream 5.0kb upstream 7735 true Chr01: 53307594-53315328 Glycine max
Glyma.01G199200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53310329-53315328 Glycine max
Glyma.01G199200 5.0kb downstream 5.0kb downstream 7735 true Chr01: 53302594-53310328 Glycine max
Glyma.01G199200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 53302594-53307593 Glycine max
Glyma.01G199200 10.0kb upstream 10.0kb upstream 12735 true Chr01: 53307594-53320328 Glycine max
Glyma.01G199200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53310329-53320328 Glycine max
Glyma.01G199200 10.0kb downstream 10.0kb downstream 12735 true Chr01: 53297594-53310328 Glycine max
Glyma.01G199200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 53297594-53307593 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310386 5265 Fabidae View MSA
124064125 5270 Rosid View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.768 0.0 25.0415   High
cufflinks 7.42858 0.0 27.6364   High
cufflinks 0.668637 0.0 4.26301    
cufflinks 0.813219 0.0 5.08481    
cufflinks 0.472925 0.0 2.2488    
cufflinks 0.475367 0.0 2.306    
cufflinks 4.16486 0.0 18.6868   High
cufflinks 0.741724 0.0 4.92163    
cufflinks 0.14783 0.0 1.12882 Low Low
cufflinks 0.222        
cufflinks 0.017     Low Low
cufflinks 0.15        
cufflinks 0.037     Low  
cufflinks 0.099        
cufflinks 0.005     Low Low
cufflinks 1.368       High
cufflinks 0.015     Low Low
cufflinks 0.334        
cufflinks 0.558        
cufflinks 1.156       High
cufflinks 0.023     Low  
cufflinks 1.201       High
cufflinks 1.152       High
cufflinks 0.016     Low Low
cufflinks 1.097       High
cufflinks 0.025     Low  

0 Strain