Gene : Glyma.01G196100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  1961
Name:  ? Glyma.01G196100 Secondary Identifier:  ? PAC:30543286
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G196100 0.5kb upstream 0.5kb upstream 3370 true Chr01: 53026873-53030242 Glycine max
Glyma.01G196100 0.5kb upstream 0.5kb upstream 500 false Chr01: 53026873-53027372 Glycine max
Glyma.01G196100 0.5kb downstream 0.5kb downstream 3370 true Chr01: 53027373-53030742 Glycine max
Glyma.01G196100 0.5kb downstream 0.5kb downstream 500 false Chr01: 53030243-53030742 Glycine max
Glyma.01G196100 1.0kb upstream 1.0kb upstream 3870 true Chr01: 53026373-53030242 Glycine max
Glyma.01G196100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 53026373-53027372 Glycine max
Glyma.01G196100 1.0kb downstream 1.0kb downstream 3870 true Chr01: 53027373-53031242 Glycine max
Glyma.01G196100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 53030243-53031242 Glycine max
Glyma.01G196100 2.0kb upstream 2.0kb upstream 4870 true Chr01: 53025373-53030242 Glycine max
Glyma.01G196100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 53025373-53027372 Glycine max
Glyma.01G196100 2.0kb downstream 2.0kb downstream 4870 true Chr01: 53027373-53032242 Glycine max
Glyma.01G196100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 53030243-53032242 Glycine max
Glyma.01G196100 5.0kb upstream 5.0kb upstream 7870 true Chr01: 53022373-53030242 Glycine max
Glyma.01G196100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 53022373-53027372 Glycine max
Glyma.01G196100 5.0kb downstream 5.0kb downstream 7870 true Chr01: 53027373-53035242 Glycine max
Glyma.01G196100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 53030243-53035242 Glycine max
Glyma.01G196100 10.0kb upstream 10.0kb upstream 12870 true Chr01: 53017373-53030242 Glycine max
Glyma.01G196100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 53017373-53027372 Glycine max
Glyma.01G196100 10.0kb downstream 10.0kb downstream 12870 true Chr01: 53027373-53040242 Glycine max
Glyma.01G196100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 53030243-53040242 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313200 5265 Fabidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00974405 0.0 0.0440677 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.164276 0.0 0.63273 Low  
cufflinks 0.0159211 0.0 0.0689636 Low Low
cufflinks 0.632288 0.0 2.27004    
cufflinks 0.108579 0.0 0.424974 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.181614 0.0 0.695361 Low  
cufflinks 2.91223 0.0 8.77817   High
cufflinks 0.91        
cufflinks 0.352        
cufflinks 0.064     Low  
cufflinks 0.05     Low  
cufflinks 0.095        
cufflinks 12.135     High High
cufflinks 0.006     Low Low
cufflinks 3.742       High
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.593        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.09        
cufflinks 0.026     Low  
cufflinks 1.189        

0 Strain